Talks
PDF slides of the talks
- 2004-10 Optimizing GROMACS for parallel performance 16.14 MB
- 2005-11 Flow Control: A prerequisite for Ethernet scaling 6.0 MB
- 2005-04 Towards an efficient implementation of PME on low-bandwidth Linux clusters 2.53 MB
- 2006-09 Fast MD on slow networks 13.08 MB
- 2006-10 Parallel Programming with the Message Passing Interface 2.36 MB
- 2007-12 Optimizing the parallel performance of GROMACS 13.11 MB
- 2007-06 Effiziente Parallelisierung von Molekulardynamik-Simulationen 19.89 MB
- 2007-10 A Brownian dynamics interpretation of membrane protein clustering 10.94 MB
- 2008-09 Improving PME on distributed computer systems 9.95 MB
- 2009-04 Getting started with Eclipse 7.15 MB
- 2010-05 Studying rotary motions in proteins: the flexible axis approach 11.08 MB
- 2011-10 Spicing up GROMACS 8.72 MB
- 2012-03 Scientific Poster Workshop 9.04 MB
- 2013-09 Scaling of GROMACS 4.6 on the LRZ SuperMUC cluster 6.5 MB
- 2014-01-23 Scientific Plots Workout 6.38 MB
- 2016-05 Compute Power Optimization by Cluster & Simulation Setup 7.76 MB
- 2017-05 Cost Efficient MD Simulations 2.17 MB
- 2018-10 Saving Money with GROMACS 7.89 MB
- 2019-05 Outperforming Professional HPC With Consumer GPUs and Hardware Re-Use 5.03 MB
- 2019-09 More Bang for Your Buck: Improved use of GPU Nodes for GROMACS 2018 7.3 MB
- 2021-02-06 How to lift GROMACS into a cloudy SLURM cluster 5.63 MB
- 2021-12 Large-scale GROMACS biomolecular simulations in the Cloud 12.75 MB
- 2023-12 Large Scale Biomolecular Simulations in the Cloud 8.61 MB
Recordings
BioExcel Webinar #37
A recording of the 37th webinar in BioExcel’s series on computational methods and applications for biomolecular research. It covers many topics from the 2019 JCC publication More bang for your buck: Improved use of GPU nodes for GROMACS 2018.
https://www.youtube.com/watch?v=krRCKMfTEdA
BioExcel Webinar Series #6
A recording of the 6th webinar in BioExcel’s series on computational methods and applications for biomolecular research. It covers many topics from the 2015 JCC publication Best bang for your buck: GPU nodes for GROMACS biomolecular simulations.
https://www.youtube.com/watch?v=iaPZHzd1nzs