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Journal Article (12634)

1.
Journal Article
Hundrieser, S.; Mordant, G.; Weitkamp, C.A.; Munk, A.: Empirical optimal transport under estimated costs: Distributional limits and statistical applications. Stochastic Processes and their Applications 178, 104462 (2024)
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2.
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Soares, E. S.; Queiroz, L. Y.; Gerhardt, E.; Prediger, R. D. S.; Outeiro, T. F.; Cimarosti, H. I.: SUMOylation modulates mitochondrial dynamics in an in vitro rotenone model of Parkinson's disease. Molecular and Cellular Neuroscience 131, 103969 (2024)
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van der Ham, A.: Discontinuous hyperpolarization schemes in liquid-state overhauser dynamic nuclear polarization experiments. Journal of Magnetic Resonance Open 21, 100160 (2024)
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4.
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Hundrieser, S.; Klatt, M.; Munk, A.; Staudt, T.: A unifying approach to distributional limits for empirical optimal transport. Bernoulli 30 (4), pp. 2846 - 2877 (2024)
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Kumar, P.; Zhang, X.; Shaha, R.; Kschischo, M.; Dobbelstein, M.: Identification of antibody-resistant SARS-CoV-2 mutants via N4-Hydroxycytidine mutagenesis. Antiviral Research 231, 106006 (2024)
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6.
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Dibaj, P.; Safavi-Abbasi, S.; Asadollahi, E.: In vivo spectrally unmixed multi-photon imaging of longitudinal axon-glia changes in injured spinal white matter. Neuroscience Letters 841, 137959 (2024)
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7.
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Sahl, S. J.; Matthias, J.; Inamdar, K.; Weber, M.; Khan, T. A.; Brüser, C.; Jakobs, S.; Becker, S.; Griesinger, C.; Broichhagen, J. et al.; Hell, S. W.: Direct optical measurement of intramolecular distances with angstrom precision. Science 386, pp. 180 - 187 (2024)
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8.
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Shaib, A. H.; Chouaib, A. A.; Chowdhury, R.; Altendorf, J.; Mihaylov, D.; Zhang, C.; Krah, D.; Imani, V.; Spencer, R. K. W.; Georgiev, S. V. et al.; Mougios, N.; Monga, M.; Reshetniak, S.; Mimoso, T.; Chen, H.; Fatehbasharzad, P.; Crzan, D.; Saal, K.-A.; Alawieh, M. M.; Alawar, N.; Eilts, J.; Kang, J.; Soleimani, A.; Müller, M.; Pape, C.; Alvarez, L.; Trenkwalder, C.; Mollenhauer, B.; Outeiro, T. F.; Köster, S.; Preobraschenski, J.; Becherer, U.; Moser, T.; Boyden, E. S.; Aricescu, A. R.; Sauer, M.; Opazo, F.; Rizzoli, S. O.: One-step nanoscale expansion microscopy reveals individual protein shapes. Nature Biotechnology (2024)
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9.
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Sterle, M.; Habjan, E.; Piga, M.; Peršolja, P.; Durcik, M.; Dernovšek, J.; Szili, P.; Czikkely, M. S.; Zidar, N.; Janez, I. et al.; Pal, C.; Accetto, T.; Pardo, L. A.; Kikelj, D.; Peterlin Mašič, L.; Tomašič, T.; Bitter, W.; Cotman, A. E.; Speer, A.; Zega, A.: Development of narrow-spectrum topoisomerase-targeting antibacterials against mycobacteria. European Journal of Medicinal Chemistry 276, 116693 (2024)
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10.
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Fonseca-Gomes, J.; Costa-Coelho, T.; Ferreira-Manso, M.; Inteiro-Oliveira, S.; Vaz, S.H.; Alemãn-Serrano, N.; Atalaia-Barbacena, H.; Ribeiro-Rodrigues, L.; Ramalho, R.M.; Pinto, R. et al.; Vicente Miranda, H.; Tanqueiro, S.R.; de Almeida-Borlido, C.; Ramalho, M.J.; Miranda-Lourenço, C.; Belo, R.F.; Ferreira, C.B.; Neves, V.; Rombo, D.M.; Viais, R.; Martins, I.C.; Jerónimo-Santos, A.; Caetano, A.; Manso, N.; Mäkinen, P.; Marttinen, M.; Takalo, M.; Bremang, M.; Pike, I.; Haapasalo, A.; Loureiro, J.A.; Pereira, M.C.; Santos, N.C.; Outeiro, T. F.; Castanho, M.A.R.B.; Fernandes, A.; Hiltunen, M.; Duarte, C.B.; Castrén, E.; de Mendonça, A.; Sebastião, A.M.; Rodrigues, T.M.; Diógenes, M.J.: A small TAT-TrkB peptide prevents BDNF receptor cleavage and restores synaptic physiology in Alzheimer's disease. Molecular Therapy 32 (10), pp. 3372 - 3401 (2024)
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11.
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Fokken, C.; Silbern, I.; Shomroni, O.; Pan, K.-T.; Ryazanov, S.; Leonov, A.; Winkler, N.; Urlaub, H.; Griesinger, C.; Becker, D.: Interfering with aggregated α-synuclein in advanced melanoma leads to a major upregulation of MHC class II proteins. Melanoma Research 34 (5), pp. 393 - 407 (2024)
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12.
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Gapsys, V.; Kopec, W.; Matthes, D.; de Groot, B. L.: Biomolecular simulations at the exascale: From drug design to organelles and beyond. Current Opinion in Structural Biology 88, 102887 (2024)
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13.
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Jochheim, A.; Jochheim, F. A.; Kolodyazhnaya, A.; Morice, É.; Steinegger, M.; Söding, J.: Strain-resolved de-novo metagenomic assembly of viral genomes and microbial 16S rRNAs. Microbiome 12, 187 (2024)
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14.
Journal Article
Mishto, M.; Takala, I.; Bonfanti, P.; Liepe, J.: Proteasome isoforms in human thymi and mouse models. Immunology Letters 269, 106899 (2024)
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15.
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Soheilifar, M.H.; Masoudi-Khoram, N.; Hassani, M.; Hajialiasgary Najafabadi, A.; Khojasteh, M.; Keshmiri Neghab, H.; Jalili, Z.: Angio-microRNAs in diabetic foot ulcer-: Mechanistic insights and clinical perspectives. Progress in Biophysics and Molecular Biology 192, pp. 1 - 10 (2024)
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16.
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Siems, S. B.; Gargareta, V.-I.; Schadt, L. C.; Daguano Gastaldi, V.; Jung, R. B.; Piepkorn, L.; Casaccia, P.; Sun, T.; Jahn, O.; Werner, H. B.: Developmental maturation and regional heterogeneity but no sexual dimorphism of the murineCNSmyelin proteome. Glia (2024)
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17.
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Ivanković, M.; Brand, J. N.; Pandolfini, L.; Brown, T.; Pippel, M.; Rozanski, A.; Schubert, T.; Grohme, M. A.; Winkler, S.; Robledillo, L. et al.; Zhang, M.; Codino, A.; Gustincich, S.; Vila-Farré, M.; Zhang, S.; Papantonis, A.; Marques, A.; Rink, J. C.: A comparative analysis of planarian genomes reveals regulatory conservation in the face of rapid structural divergence. Nature Communications 15, 8215 (2024)
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18.
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Mendez-Otalvaro, E.; Kopec, W.; de Groot, B. L.: Effect of two activators on the gating of a K2P channel. Biophysical Journal (2024)
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19.
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Petrychenko, V.; Yi, S.-H.; Liedtke, D.; Peng, B.-Z.; Rodnina, M. V.; Fischer, N.: Structural basis for translational control by the human 48S initiation complex. Nature Structural & Molecular Biology (2024)
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20.
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Schleske, J. M.; Hubrich, J.; Wirth, J. O.; D’Este, E.; Engelhardt, J.; Hell, S. W.: MINFLUX reveals dynein stepping in live neurons. Proceedings of the National Academy of Sciences of the United States of America 121 (38), e2412241121 (2024)
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21.
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Zeppillo, T.; Ali, H.; Ravichandran, S.; Ritter, T. C.; Wenger, S.; López-Murcia, F. J.; Gideons, E.; Signorelli, J.; Schmeisser, M. J.; Wiltfang, J. et al.; Rhee, J. S.; Brose, N.; Taschenberger, H.; Krüger-Burg, D. D.: Functional Neuroligin-2-MDGA1 interactions differentially regulate synaptic GABAARs and cytosolic gephyrin aggregation. Communications Biology 7, 1157 (2024)
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22.
Journal Article
Naas, J.; Nies, G.; Li, H.; Stoldt, S.; Schmitzer, B.; Jakobs, S.; Munk, A.: MultiMatch: geometry-informed colocalization in multi-color super-resolution microscopy. Communications Biology 7, 1139 (2024)
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23.
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Asadollahi, E.; Nave, K.-A.: Myelin lipid metabolism can provide energy for starved axons. Nature Neuroscience (2024)
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24.
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Engeholm, M.; Roske, J. J.; Oberbeckmann, E.; Dienemann, C.; Lidschreiber, M.; Cramer, P.; Farnung, L.: Resolution of transcription-induced hexasome-nucleosome complexes by Chd1 and FACT. Molecular Cell 84 (18), pp. 3423 - 3437.e8 (2024)
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25.
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Abdelaziz, R.; Tomczak, A. P.; Neef, A.; Pardo, L. A.: Revealing a hidden conducting state by manipulating the intracellular domains in KV10.1 exposes the coupling between two gating mechanisms. eLife 12, RP91420 (2024)
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26.
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Fries, L.; Hune, T. L. K.; Sternkopf, S.; Mamone, S.; Schneider, K. L.; Schulz-Heddergott, R.; Becker, D.; Glöggler, S.: Real-Time Metabolic Magnetic Resonance Spectroscopy of Pancreatic and Colon Cancer Tumor-Xenografts with Parahydrogen Hyperpolarized 1-13C Pyruvate-d3. Chemistry – A European Journal 30 (51), e202400187 (2024)
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27.
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Asadollahi, E.; Trevisiol, A.; Saab, A. S.; Looser, Z. J.; Dibaj, P.; Ebrahimi, R.; Kusch, K.; Ruhwedel, T.; Möbius, W.; Jahn, O. et al.; Lee, J. Y.; Don, A. S.; Khalil, M.-A.; Hiller, K.; Baes, M.; Weber, B.; Abel, E. D.; Ballabio, A.; Popko, B.; Kassmann, C. M.; Ehrenreich, H.; Hirrlinger, J.; Nave, K.-A.: Oligodendroglial fatty acid metabolism as a central nervous system energy reserve. Nature Neuroscience (2024)
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28.
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Stephan, T.; Ilgen, P.; Jakobs, S.: Visualizing mitochondrial dynamics at the nanoscale. Light: Science & Applications 13, 244 (2024)
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29.
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Tan, L.; Zschüntzsch, J.; Meyer, S.; Stobbe, A.; Bruex, H.; Regensburger, A. P.; Claßen, M.; Alves, F.; Jüngert, J.; Rother, U. et al.; Li, Y.; Danko, V.; Lang, W.; Türk, M.; Schmidt, S.; Vorgerd, M.; Schlaffke, L.; Woelfle, J.; Hahn, A.; Mensch, A.; Winterholler, M.; Trollmann, R.; Heiß, R.; Wagner, A. L.; Raming, R.; Knieling, F.: Non-invasive optoacoustic imaging of glycogen-storage and muscle degeneration in late-onset Pompe disease. Nature Communications 15, 7843 (2024)
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30.
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Van den Eynde, R.; Hertel, F.; Abakumov, S.; Krajnik, B.; Hugelier, S.; Auer, A.; Hellmeier, J.; Schlichthaerle, T.; Grattan, R. M.; Lidke, D. S. et al.; Jungmann, R.; Leutenegger, M.; Vandenberg, W.; Dedecker, P.: Simultaneous multicolor fluorescence imaging using PSF splitting. Nature Methods (2024)
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31.
Journal Article
Remmel, L.; Meyer, A.; Ackermann, K.; Hagelueken, G.; Bennati, M.; Bode, B. E.: Pulse EPR Methods in the Angstrom to Nanometre Scale Shed Light on the Conformational Flexibility of a Fluoride Riboswitch. Angewandte Chemie International Edition (2024)
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32.
Journal Article
Schmidt-Räntsch, T.; Verplancke, H.; Kehl, A.; Sun, J.; Bennati, M.; Holthausen, M. C.; Schneider, S.: C═C Dissociative Imination of Styrenes by a Photogenerated Metallonitrene. JACS Au 4 (9), pp. 3421 - 3426 (2024)
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33.
Journal Article
Chiu, P.-L.; Orjuela, J. D.; de Groot, B. L.; Aponte Santamaría, C.; Walz, T.: Structure and dynamics of cholesterol-mediated aquaporin-0 arrays and implications for lipid rafts. eLife 12, RP90851 (2024)
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34.
Journal Article
Kim, D.; Bossi, M. L.; Belov, V. N.; Hell, S. W.: Supramolecular Complex of Cucurbit[7]uril with Diketopyrrolopyrole Dye: Fluorescence Boost, Biolabeling and Optical Microscopy. Angewandte Chemie International Edition 63 (36), e202410217 (2024)
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35.
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Amaral, L.; Mendes, F.; Côrte-Real, M.; Rego, A.; Outeiro, T. F.; Chaves, S. R.: A versatile yeast model identifies the pesticides cymoxanil and metalaxyl as risk factors for synucleinopathies. Chemosphere 364, 143039 (2024)
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36.
Journal Article
Gargareta, V.-I.; Berghoff, S. A.; Krauter, D.; Hümmert, S.; Marshall‐Phelps, K. L. H.; Möbius, W.; Nave, K.-A.; Fledrich, R.; Werner, H. B.; Eichel-Vogel, M. A.: Myelinated peripheral axons are more vulnerable to mechanical trauma in a model of enlarged axonal diameters. Glia 72 (9), pp. 1572 - 1589 (2024)
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37.
Journal Article
Lahiri, S. K.; Lu, J.; Aguilar-Sanchez, Y.; Li, H.; Moreira, L. M.; Hulsurkar, M. M.; Mendoza, A.; Turkieltaub Paredes, M. R.; Navarro-Garcia, J. A.; Munivez, E. et al.; Horist, B.; Moore, O. M.; Weninger, G.; Brandenburg, S.; Lenz, C.; Lehnart, S. E.; Sayeed, R.; Krasopoulos, G.; Srivastava, V.; Zhang, L.; Karch, J. M.; Reilly, S.; Wehrens, X. H.T.: Targeting calpain-2-mediated junctophilin-2 cleavage delays heart failure progression following myocardial infarction. Journal of Molecular and Cellular Cardiology 194, pp. 85 - 95 (2024)
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Journal Article
Vasiliu, A.; Martinez, L.; Gupta, R. K.; Hamada, Y.; Ness, T.; Kay, A.; Bonnet, M.; Sester, M.; Kaufmann, S. H. E.; Lange, C. et al.; Mandalakas, A. M.: Tuberculosis prevention: current strategies and future directions. Clinical Microbiology and Infection 30 (9), pp. 1123 - 1130 (2024)
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da Silva Correia, A.; Schmitz, M.; Fischer, A.; da Silva Correia, S.; Simonetti, F. L.; Saher, G.; Goya‐Maldonado, R.; Arora, A. S.; Fischer, A.; Outeiro, T. F. et al.; Zerr, I.: Cellular prion protein acts as mediator of amyloid beta uptake by caveolin‐1 causing cellular dysfunctions in vitro and in vivo. Alzheimer's & Dementia (2024)
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40.
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Bredfeldt, J.-E.; Oracz, J.; Kiszka, K. A.; Moosmayer, T.; Weber, M.; Sahl, S. J.; Hell, S. W.: Bleaching protection and axial sectioning in fluorescence nanoscopy through two-photon activation at 515 nm. Nature Communications 15, 7472 (2024)
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41.
Journal Article
Vollmar, L.; Bebon, R.; Schimpf, J.; Flietel, B.; Celiksoy, S.; Sönnichsen, C.; Godec, A.; Hugel, T.: Model-free inference of memory in conformational dynamics of a multi-domain protein. Journal of Physics A 57 (36), 365001 (2024)
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42.
Journal Article
Wolff, C.; John, D.; Winkler, U.; Hochmuth, L.; Hirrlinger, J.; Köhler, S.: Insulin and leptin acutely modulate the energy metabolism of primary hypothalamic and cortical astrocytes. Journal of Neurochemistry (2024)
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43.
Journal Article
Gordon, S.; Roberti, A.; Kaufmann, S. H. E.: Mononuclear Phagocytes, Cellular Immunity, and Nobel Prizes: A Historic Perspective. Cells 13 (16), 1378 (2024)
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44.
Journal Article
Lanza, L.; Rabe von Pappenheim, F.; Bjarnesen, D.; Leogrande, C.; Paul, A.; Krug, L.; Tittmann, K.; Müller, M.: Identification and Characterization of Thiamine Diphosphate‐Dependent Lyases with an Unusual CDG Motif. Angewandte Chemie International Edition 63 (34), e202404045 (2024)
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45.
Journal Article
Notter, S.; Choezom, D.; Griebel, T.; Ramos Gomes, F.; Möbius, W.; De Oliveira, T.; Conradi, L.-C.; Alves, F.; Feldmann, C.: High-Load Core@Shell Nanocarriers with Irinotecan and 5-Fluorouracil for Combination Chemotherapy in Colorectal Cancer. Small science (2024)
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46.
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Domröse, T.; Ropers, C.: Femtosecond trimer quench in the unconventional charge-density-wave material 1⁢T'−TaTe2. Physical Review B 110 (8), 085155 (2024)
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47.
Journal Article
Sailer, A.-L.; Jevtic, Z.; Stoll, B.; Wörtz, J.; Sharma, K.; Urlaub, H.; Dyall-Smith, M.; Pfeiffer, F.; Marchfelder, A.; Lenz, C.: Iron starvation results in up-regulation of a probable Haloferax volcanii siderophore transporter. Frontiers in Microbiology 15, 1422844 (2024)
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48.
Journal Article
Ganuza, M.; Morales-Hernandez, A.; Van Huizen, A.; Chabot, A.; Hall, T.; Caprio, C.; Finkelstein, D.; Kilimann, M. W.; McKinney-Freeman, S.: Neurobeachin regulates hematopoietic progenitor differentiation and survival by modulating Notch activity. Blood Advances 8 (15), pp. 4129 - 4143 (2024)
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49.
Journal Article
Aich, A.; Boshnakovska, A.; Witte, S.; Gall, T.; Unthan-Fechner, K.; Yousefi, R.; Chowdhury, A.; Dahal, D.; Methi, A.; Kaufmann, S. et al.; Silbern, I.; Prochazka, J.; Nichtova, Z.; Palkova, M.; Raishbrook, M.; Koubkova, G.; Sedlacek, R.; Tröder, S.E.; Zevnik, B.; Riedel, D.; Michanski, S.; Möbius, W.; Ströbel, P.; Lüchtenborg, C.; Giavalisco, P.; Urlaub, H.; Fischer, A.; Brügger, B.; Jakobs, S.; Rehling, P.: Defective mitochondrial COX1 translation due to loss of COX14 function triggers ROS-induced inflammation in mouse liver. Nature Communications 15, 6914 (2024)
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50.
Journal Article
Hollstein, M. M.; Traidl, S.; Heetfeld, A.; Forkel, S.; Leha, A.; Alkon, N.; Ruwisch, J.; Lenz, C.; Schön, M. P.; Schmelz, M. et al.; Brunner, P.; Steinhoff, M.; Buhl, T.: Skin microdialysis detects distinct immunological patterns in chronic inflammatory skin diseases. The journal of Allergy and Clinical Immunology (2024)
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