Publications

Journal Article (348)

1.
Journal Article
Gomez, A.; Erb, T. J.; Grubmüller, H.; Vöhringer-Martinez, E.: Conformational Dynamics of the Most Efficient Carboxylase Contributes to Efficient CO2 Fixation. Journal of Chemical Information and Modeling 63 (24), pp. 7807 - 7815 (2023)
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Biggemann, L.; Uhlig, J.; Streit, U.; Al-Bourini, O.; Wedi, E.; Amanzada, A.; Ellenrieder, V.; Rühlmann, F.; Ghadimi, M.; Frahm, J. et al.; Uecker, M.; Hosseini, A. S. A.: Visualization of deglutition and gastroesophageal reflux using real-time MRI: a standardized approach to image acquisition and assessment. Scientific Reports 13 (1), 22854 (2023)
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Laukien, F. H.; Banci, L.; Meier, B. H.; Kessler, H.; Griesinger, C.: Tony W. Keller (1937-2023). Angewandte Chemie International Edition 62 (52), e202316747 (2023)
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Helm, M.; Bohnsack, M.T.; Carell, T.; Dalpke, A.; Entian, K.-D.; Ehrenhofer-Murray, A.; Ficner, R.; Hammann, C.; Höbartner, C.; Jäschke, A. et al.; Jeltsch, A.; Kaiser, S.; Klassen, R.; Leidel, S.A.; Marx, A.; Mörl, M.; Meier, J.C.; Meister, G.; Rentmeister, A.; Rodnina, M. V.; Roignant, J.-Y.; Schaffrath, R.; Stadler, P.; Stafforst, T.: Experience with German Research Consortia in the Field of Chemical Biology of Native Nucleic Acid Modifications. ACS Chemical Biology 18 (12), pp. 2441 - 2449 (2023)
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Mitronova, G.; Quentin, C.; Belov, V. N.; Wegener, J.W.; Kiszka, K. A.; Lehnart, S.E.: 1,4-Benzothiazepines with Cyclopropanol Groups and Their Structural Analogues Exhibit Both RyR2-Stabilizing and SERCA2a-Stimulating Activities. Journal of Medicinal Chemistry 66 (23), pp. 15761 - 15775 (2023)
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6.
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Chen, H.; Fang, Q.; Benseler, F.; Brose, N.; Moser, T.: Probing the role of the C2F domain of otoferlin. Frontiers in Molecular Neuroscience 16, 1299509 (2023)
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7.
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Sun, Y.; Wiese, M.; Hmadi, R.; Karayol, R.; Seyfferth, J.; Martinez Greene, J.A.; Erdogdu, N.U.; Deboutte, W.; Arrigoni, L.; Holz, H. et al.; Renschler, G.; Hirsch, N.; Foertsch, A.; Basilicata, M.F.; Stehle, T.; Shvedunova, M.; Bella, C.; Pessoa Rodrigues, C.; Schwalb, B.; Cramer, P.; Manke, T.; Akhtar, A.: MSL2 ensures biallelic gene expression in mammals. Nature 624 (7990), pp. 173 - 181 (2023)
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8.
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Sundaram, V. K.; Schütza, V.; Schröter, N. H.; Backhaus, A.; Bilsing, A.; Joneck, L.; Seelbach, A.; Mutschler, C.; Gomez-Sanchez, J. A.; Schäffner, E. et al.; Sánchez, E. E.; Akkermann, D.; Paul, C.; Schwagarus, N.; Müller, S.; Odle, A.; Childs, G.; Ewers, D.; Kungl, T.; Sitte, M.; Salinas, G.; Sereda, M. W.; Nave, K.-A.; Schwab, M. H.; Ost, M.; Arthur-Farraj, P.; Stassart, R. M.; Fledrich, R.: Adipo-glial signaling mediates metabolic adaptation in peripheral nerve regeneration. Cell Metabolism 35 (12), pp. 2136 - 2152.e9 (2023)
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9.
Journal Article
Svetlove, A.; Ritter, C.O.; Dullin, C.; Schmid, M.; Schauer, S.; Uihlein, J.; Uecker, M.; Mietsch, M.; Stadelmann, C.; Lotz, J. et al.; Unterberg-Buchwald, C.: Evaluation of MR-safe bioptomes for MR-guided endomyocardial biopsy in minipigs: a potential radiation-free clinical approach. European Radiology Experimental 7 (1), 76 (2023)
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10.
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Wicke, D.; Neumann, P.; Goessringer, M.; Chernev, A.; Davydov, S.; Poehlein, A.; Daniel, R.; Urlaub, H.; Hartmann, R. K.; Ficner, R. et al.; Stuelke, J.: The previously uncharacterized RnpM (YlxR) protein modulates the activity of ribonuclease P in Bacillus subtilis in vitro. Nucleic Acids Research 52 (3), pp. 1404 - 1409 (2023)
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11.
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Ukmar-Godec, T.; Cima-Omori, M.-S.; Yerkesh, Z.; Eswara, K.; Yu, T.; Ramesh, R.; Riviere, G.; de Opakua, A.I.; Fischle, W.; Zweckstetter, M.: Multimodal interactions drive chromatin phase separation and compaction. Proceedings of the National Academy of Sciences of the United States of America 120 (50), e2308858120 (2023)
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12.
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Cobanoglu, O.; Delval, L.; Ferrari, D. P.; Deruyter, L.; Heumel, S.; Wolowczuk, I.; Hussein, A.; Menevse, A. N.; Bernard, D.; Beckhove, P. et al.; Alves, F.; Trottein, F.: Depletion of preexisting B-cell lymphoma 2-expressing senescent cells before vaccination impacts antigen-specific antitumor immune responses in old mice. Aging Cell 22 (12), e14007 (2023)
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13.
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Hune, T. L. K.; Mamone, S.; Schmidt, A. B.; Mahú, I.; D'Apolito, N.; Wiedermann, D.; Brüning, J.; Glöggler, S.: Hyperpolarized Multi-organ Spectroscopy of Liver and Brain using 1-13C-Pyruvate Enhanced via Parahydrogen. Applied Magnetic Resonance 54, pp. 1283 - 1295 (2023)
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14.
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Monteiro Neto, J. R.; Ribeiro, G. D.; Magalhães, R. S. S.; Follmer, C.; Outeiro, T. F.; Eleutherio, E. C. A.: Glycation modulates superoxide dismutase 1 aggregation and toxicity in models of sporadic amyotrophic lateral sclerosis. Biochimica et Biophysica Acta-Molecular Basis of Disease 1869 (8), 166835 (2023)
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Moser, T.; Karagulyan, N.; Neef, J.; Jaime Tobón, L. M.: Diversity matters — extending sound intensity coding by inner hair cells via heterogeneous synapses. The EMBO Journal 42 (23), e114587 (2023)
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16.
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Nave, K.-A.; Asadollahi, E.; Sasmita, A. O.: Expanding the function of oligodendrocytes to brain energy metabolism. Current Opinion in Neurobiology 83, 102782 (2023)
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17.
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Röwer, L. M.; Radke, K. L.; Hußmann, J.; Malik, H.; Eichinger, M.; Voit, D.; Wielpütz, M. O.; Frahm, J.; Klee, D.; Pillekamp, F.: First experience with real-time magnetic resonance imaging-based investigation of respiratory influence on cardiac function in pediatric congenital heart disease patients with chronic right ventricular volume overload. Pediatric Radiology 53, pp. 2608 - 2621 (2023)
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18.
Journal Article
Sigmund, F.; Berezin, O.; Beliakova, S.; Magerl, B.; Drawitsch, M.; Piovesan, A.; Gonçalves, F.; Bodea, S.-V.; Winkler, S.; Bousraou, Z. et al.; Grosshauser, M.; Samara, E.; Pujol-Martí, J.; Schädler, S.; So, C.; Irsen, S.; Walch, A.; Kofler, F.; Piraud, M.; Kornfeld, J.; Briggman, K.; Westmeyer, G. G.: Genetically encoded barcodes for correlative volume electron microscopy. Nature Biotechnology 41, pp. 1734 - 1745 (2023)
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19.
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Tekwani Movellan, K.; Wegstroth, M.; Overkamp, K.; Leonov, A.; Becker, S.; Andreas, L. B.: Real-time tracking of drug binding to influenza A M2 reveals a high energy barrier. Journal of Structural Biology: X 8, 100090 (2023)
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20.
Journal Article
Voit, D.; Kollmeier, J. M.; Kalentev, O.; van Zalk, M.; Frahm, J.: Whole-body magnetic resonance imaging in two minutes: cross-sectional real-time coverage of multiple volumes. Quantitative Imaging in Medicine and Surgery 13 (12), pp. 8739 - 8746 (2023)
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21.
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Maji, A.; Soutar, C. P.; Zhang, J.; Lewandowska, A.; Uno, B. E.; Yan, S.; Shelke, Y.; Murhade, G.; Nimerovsky, E.; Borcik, C. G. et al.; Arango, A. S.; Lange, J. D.; Marin-Toledo, J. P.; Lyu, Y.; Bailey, K. L.; Roady, P. J.; Holler, J. T.; Khandelwal, A.; SantaMaria, A. M.; Sanchez, H.; Juvvadi, P. R.; Johns, G.; Hageman, M. J.; Krise, J.; Gebremariam, T.; Youssef, E. G.; Bartizal, K.; Marr, K. A.; Steinbach, W. J.; Ibrahim, A. S.; Patterson, T. F.; Wiederhold, N. P.; Andes, D. R.; Pogorelov, T. V.; Schwieters, C. D.; Fan, T. M.; Rienstra, C. M.; Burke, M. D.: Tuning sterol extraction kinetics yields a renal-sparing polyene antifungal. Nature 623, pp. 1079 - 1085 (2023)
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22.
Journal Article
Heinz, L.; Grubmüller, H.: Why Solvent Response Contributions to Solvation Free Energies Are Compatible with Ben-Naim’s Theorem. Journal of Chemical Theory and Computation 19 (22), pp. 8013 - 8019 (2023)
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23.
Journal Article
Damgaard, V.; Mariegaard, J.; Lindhardsen, J. M.; Ehrenreich, H.; Miskowiak, K. W.; Ahmed, Z.: Neuroprotective Effects of Moderate Hypoxia: A Systematic Review. Brain Sciences 13 (12), 1648 (2023)
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24.
Journal Article
Dieball, C.; Wellecke, G.; Godec, A.: Asymmetric thermal relaxation in driven systems: Rotations go opposite ways. Physical Review Research 5 (4), L042030 (2023)
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25.
Journal Article
Windhorst, U.; Dibaj, P.: Plastic Spinal Motor Circuits in Health and Disease. Journal of Integrative Neuroscience 22 (6), 167 (2023)
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26.
Journal Article
Garnier, N.; Berghout, J.; Zygmunt, A.; Singh, D.; Huang, K. A.; Kantz, W.; Blankart, C. R.; Gillner, S.; Zhao, J.; Roettger, R. et al.; Saier, C.; Kirschner, J.; Schenk, J.; Atkins, L.; Ryan, N.; Zarakowska, K.; Zschuentzsch, J.; Zuccolo, M.; Muellenborn, M.; Man, Y.-S.; Goodman, L.; Trad, M.; Chalandon, A. S.; Sansen, S.; Martinez-Fresno, M.; Badger, S.; Walther van Olden, R.; Rothmann, R.; Lehner, P.; Tschohl, C.; Baillon, L.; Gumus, G.; Gross, E.; Stefanov, R.; Iskrov, G.; Raycheva, R.; Kostadinov, K.; Mitova, E.; Einhorn, M.; Einhorn, Y.; Schepers, J.; Huebner, M.; Alves, F.; Iskandar, R.; Mayer, R.; Renieri, A.; Piperkova, A.; Gut, I.; Beltran, S.; Matthiesen, M. E.; Poetz, M.; Hansson, M.; Trollmann, R.; Agolini, E.; Ottombrino, S.; Novelli, A.; Bertini, E.; Selvatici, R.; Farne, M.; Fortunato, F.; Ferlini, A.: Genetic newborn screening and digital technologies: A project protocol based on a dual approach to shorten the rare diseases diagnostic path in Europe. PLOS ONE 18 (11), e0293503 (2023)
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27.
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Gąsiorowski, L.; Dittmann, I. L.; Brand, J. N.; Ruhwedel, T.; Möbius, W.; Egger, B.; Rink, J. C.: Convergent evolution of the sensory pits in and within flatworms. BMC Biology 21 (1), 266 (2023)
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28.
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Jentoft, I. M. A.; Bäuerlein, F. J.B.; Welp, L. M.; Cooper, B. H.; Petrovic, A.; So, C.; Penir, S. M.; Politi, A. Z.; Horokhovskyi, Y.; Takala, I. et al.; Eckel, H.; Moltrecht, R.; Lenart, P.; Cavazza, T.; Liepe, J.; Brose, N.; Urlaub, H.; Fernández-Busnadiego, R.; Schuh, M.: Mammalian oocytes store proteins for the early embryo on cytoplasmic lattices. Cell 186 (24), pp. 5308 - 5327.e25 (2023)
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29.
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Gutberlet, T.; Chang, H.-T.; Zayko, S.; Sivis, M.; Ropers, C.: High-sensitivity extreme-ultraviolet transient absorption spectroscopy enabled by machine learning. Optics Express 31 (24), pp. 39757 - 39764 (2023)
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30.
Journal Article
Ischyropoulou, M.; Sabljo, K.; Schneider, L.; Niemeyer, C. M.; Napp, J.; Feldmann, C.; Alves, F.: High‐Load Gemcitabine Inorganic–Organic Hybrid Nanoparticles as an Image‐Guided Tumor‐Selective Drug‐Delivery System to Treat Pancreatic Cancer. Advanced Materials 35 (46), 2305151 (2023)
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31.
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Wittenmayer, N.; Petkova-Tuffy, A.; Borgmeyer, M.; Lee, C.; Becker, J.; Böning, A.; Kügler, S.; Rhee, J. S.; Viotti, J.S.; Dresbach, T.: S-SCAM is essential for synapse formation. Frontiers in Cellular Neuroscience 17, 1182493 (2023)
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32.
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Shi, L.; Schröder, M.; Meyer, H.-D.; Peláez, D.; Wodtke, A. M.; Golibrzuch, K.; Schönemann, A.-M.; Kandratsenka, A.; Gatti, F.: Quantum and classical molecular dynamics for H atom scattering from graphene. The Journal of Chemical Physics 159, 194102 (2023)
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Journal Article
Wilson, C.J.; Karttunen, M.; de Groot, B. L.; Gapsys, V.: Accurately Predicting Protein pKa Values Using Nonequilibrium Alchemy. Journal of Chemical Theory and Computation 19 (21), pp. 7833 - 7845 (2023)
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34.
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Fuentes-Monteverde, J. C.; Noll, M.; Das, A.; Immel, S.; Reggelin, M.; Griesinger, C.; Nath, N.: Residual-Chemical-Shift-Anisotropy-Based Enantiodifferentiation in Lyotropic Liquid Crystalline Phases Based on Helically Chiral Polyacetylenes. Angewandte Chemie International Edition 62 (46), e202309981 (2023)
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35.
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Joseph, D.; Griesinger, C.: Optimal control pulses for the 1.2-GHz (28.2-T) NMR spectrometers. Science Advances 9 (45), eadj1133 (2023)
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36.
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Dreyer, A.; Lenz, C.; Groß, U.; Bohne, W.; Zautner, A.E.: Characterization of Campylobacter jejuni proteome profiles in co-incubation scenarios. Frontiers in Microbiology 14, 1247211 (2023)
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37.
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Uranga, J.; Rabe von Pappenheim, F.; Tittmann, K.; Mata, R. A.: Dynamic Protonation States Underlie Carbene Formation in ThDP-Dependent Enzymes: A Theoretical Study. The Journal of Physical Chemistry B 127, pp. 9423 - 9432 (2023)
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38.
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Saxena, K.; Roverato, N. D.; Reithmann, M.; Mah, M. M.; Schregle, R.; Schmidtke, G.; Silbern, I.; Urlaub, H.; Aichem, A.: FAT10 is phosphorylated by IKKβ to inhibit the antiviral type-I interferon response. Life science alliance 7 (1), e202101282 (2023)
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39.
Journal Article
Chen, Y.; Kokic, G.; Dienemann, C.; Dybkov, O.; Urlaub, H.; Cramer, P.: Structure of the transcribing RNA polymerase II–Elongin complex. Nature Structural & Molecular Biology 30, pp. 1925 - 1935 (2023)
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40.
Journal Article
Gubič, Š.; Montalbano, A.; Sala, C.; Becchetti, A.; Hendrickx, L. A.; Theemsche, K. M. V.; Pinheiro-Junior, E. L.; Altadonna, G. C.; Peigneur, S.; Ilaš, J. et al.; Labro, A. J.; Pardo, L. A.; Tytgat, J.; Tomašič, T.; Arcangeli, A.; Mašič, L. P.: Immunosuppressive effects of new thiophene-based KV1.3 inhibitors. European Journal of Medicinal Chemistry 259, 115561 (2023)
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41.
Journal Article
Zhao, K.; Auerbach, D. J.; Campbell, C. T.: Calorimetric Energies and Chemical Potentials of Metal Atoms in Catalytic Nanoparticles on Oxide and Carbon Supports: Improved Size Dependencies and Adhesion Energies. ACS Catalysis 13 (21), pp. 13968 - 13981 (2023)
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Journal Article
Chatterjee, M.; Özdemir, S.; Kunadt, M.; Koel-Simmelink, M.; Boiten, W.; Piepkorn, L.; Pham, T. V.; Chiasserini, D.; Piersma, S. R.; Knol, J. C. et al.; Möbius, W.; Mollenhauer, B.; van der Flier, W. M.; Jimenez, C. R.; Teunissen, C. E.; Jahn, O.; Schneider, A.: C1q is increased in cerebrospinal fluid-derived extracellular vesicles in Alzheimer's disease: A multi-cohort proteomics and immuno-assay validation study. Alzheimer's & Dementia 19 (11), pp. 4828 - 4840 (2023)
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43.
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Cobos, C. J.; Glarborg, P.; Marshall, P.; Troe, H. J.: Re-evaluation of rate constants for the reaction N2H4 (+ M) NH2 + NH2 (+ M). Combustion and Flame 257, 112374 (2023)
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44.
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Eltzner, B.; Hansen, P. E. H.; Huckemann, S. F.; Sommer, S.: Diffusion means in geometric spaces. Bernoulli 29 (4), pp. 3141 - 3170 (2023)
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Galbusera, R.; Bahn, E.; Weigel, M.; Schaedelin, S.; Franz, J.; Lu, P.-J.; Barakovic, M.; Melie-Garcia, L.; Dechent, P.; Lutti, A. et al.; Sati, P.; Reich, D. S.; Nair, G.; Brück, W.; Kappos, L.; Stadelmann, C.; Granziera, C.: Postmortem quantitative MRI disentangles histological lesion types in multiple sclerosis. Brain Pathology 33 (6), e13136 (2023)
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46.
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Khan, A.; Markus, M. A.; Svetlove, A.; Hülsmann, S.; Alves, F.; Dullin, C.: Longitudinal x-ray based lung function measurement for monitoring Nintedanib treatment response in a mouse model of lung fibrosis. Scientific Reports 13 (1), 18637 (2023)
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47.
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Nolte, P.; Brettmacher, M.; Gröger, C. J.; Gellhaus, T.; Svetlove, A.; Schilling, A. F.; Alves, F.; Russmann, C.; Dullin, C.: Spatial correlation of 2D hard-tissue histology with 3D microCT scans through 3D printed phantoms. Scientific Reports 13 (1), 18479 (2023)
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48.
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Shen, Z.; Sun, D.; Savastano, A.; Varga, S. J.; Cima-Omori, M.-S.; Becker, S.; Honigmann, A.; Zweckstetter, M.: Multivalent Tau/PSD-95 interactions arrest in vitro condensates and clusters mimicking the postsynaptic density. Nature Communications 14, 6839 (2023)
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Bencosme-Cuevas, E.; Kim, T.K.; Nguyen, T.-T.; Berry, J.; Li, J.; Adams, L.G.; Smith, L.A.; Batool, S.A.; Swale, D.R.; Kaufmann, S. H. E. et al.; Jones-Hall, Y.; Mulenga, A.: Ixodes scapularis nymph saliva protein blocks host inflammation and complement-mediated killing of Lyme disease agent, Borrelia burgdorferi. Frontiers in Cellular and Infection Microbiology 13, 1253670 (2023)
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50.
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Drees, L.; Schneider, S.; Riedel, D.; Schuh, R.; Behr, M.: The proteolysis of ZP proteins is essential to control cell membrane structure and integrity of developing tracheal tubes in Drosophila. eLife 12, e91079 (2023)
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