Max Planck Institute for Multidisciplinary Sciences

Publications

Journal Article (281)

1.

Journal Article

Dennerlein, S.; Poerschke, S.; Oeljeklaus, S.; Wang, C.; Richter-Dennerlein, R.; Sattmann, J.; Bauermeister, D.; Hanitsch, E.; Stoldt, S.; Langer, T. et al.; Jakobs, S.; Warscheid, B.; Rehling, P.: Defining the interactome of the human mitochondrial ribosome identifies SMIM4 and TMEM223 as respiratory chain assembly factors. eLife 10, e68213 (2021)

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Bögeholz, L. A. K.; Mercier, E.; Wintermeyer, W.; Rodnina, M. V.: Kinetic control of nascent protein biogenesis by peptide deformylase. Scientific Reports 11, 24457 (2021)

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Henke, J.-W.; Raja, A. S.; Feist, A.; Huang, G.; Arend, G.; Yang, Y.; Kappert, F. J.; Wang, R. N.; Möller, M.; Pan, J. et al.; Liu, J.; Kfir, O.; Ropers, C.; Kippenberg, T. J.: Integrated photonics enables continuous-beam electron phase modulation. Nature 600 (7890), pp. 653 - 658 (2021)

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Barbarics, B.; Eildermann, K.; Kaderali, L.; Cyganek, L.; Plessmann, U.; Bodemeyer, J.; Paul, T.; Ströbel, P.; Urlaub, H.; Tirilomis, T. et al.; Lenz, C.; Bohnenberger, H.: Proteomic mapping of atrial and ventricular heart tissue in patients with aortic valve stenosis. Scientific Reports 11, 24389 (2021)

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Merino, R. M.; Leon-Pinzon, C.; Stuehmer, W.; Möck, M.; Staiger, J. F.; Wolf, F.; Neef, A.: Theta activity paradoxically boosts gamma and ripple frequency sensitivity in prefrontal interneurons. Proceedings of the National Academy of Sciences of the USA 118 (51), e2114549118 (2021)

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Segelcke, D.; Fischer, H. K.; Hütte, M.; Dennerlein, S.; Benseler, F.; Brose, N.; Pogatzki-Zahn, E. M.; Schmidt, M.: Tmem160 contributes to the establishment of discrete nerve injury-induced pain behaviors in male mice. Cell Reports 37 (12), 110152 (2021)

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Lipstein, N.; Chang, S.; Lin, K.-H.; López-Murcia, F. J.; Neher, E.; Taschenberger, H.; Brose, N.: Munc13-1 is a Ca²⁺-phospholipid-dependent vesicle priming hub that shapes synaptic short-term plasticity and enables sustained neurotransmission. Neuron 109 (24), pp. 3980 - 4000.e7 (2021)

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8.

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Saul, P.; Yang, S.; Mamone, S.; Opazo, F.; Meyer, A.; Rizzoli, S. O.; Glöggler, S.: Exotic nuclear spin behavior in dendritic macromolecules. Physical Chemistry Chemical Physics 23 (46), pp. 26349 - 26355 (2021)

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9.

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James, C.; Lenz, C.; Urlaub, H.; Kehlenbach, R. H.: Sequestosome 1 is part of the interaction network of VAPB. International Journal of Molecular Sciences 22 (24), 13271 (2021)

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Khalak, Y.; Tresadern, G.; Aldeghi, M.; Baumann, H.; Mobley, D.; de Groot, B. L.; Gapsys, V.: Alchemical absolute protein-ligand binding free energies for drug design. Chemical Science 12, pp. 13958 - 13971 (2021)

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11.

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Hartich, D.; Godec, A.: Emergent memory and kinetic hysteresis in strongly driven networks. Physical Review X 11 (4), 041047 (2021)

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12.

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Arinrad, S.; Wilke, J. B. H.; Seelbach, A.; Doeren, J.; Hindermann, M.; Butt, U. J.; Steixner-Kumar, A. A.; Spieth, L.; Ronnenberg, A.; Pan, H. et al.; Berghoff, S. A.; Hollmann, M.; Lüder, F.; Nave, K.-A.; Bechter, K.; Ehrenreich, H.: NMDAR1 autoantibodies amplify behavioral phenotypes of genetic white matter inflammation: a mild encephalitis model with neuropsychiatric relevance. Molecular Psychiatry 27, pp. 4974 - 4983 (2021)

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Mühlhausen, S.; Schmitt, H. D.; Plessmann, U.; Mienkus, P.; Sternisek, P.; Perl, T.; Weig, M.; Urlaub, H.; Bader, O.; Kollmar, M.: Proteogenomics analysis of CUG codon translation in the human pathogen Candida albicans. BMC Biology 19, 258 (2021)

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Boehm, U.; Nelson, G.; Brown, C. M.; Bagley, S.; Bajcsy, P.; Bischof, J.; Dauphin, A.; Dobbie, I. M.; Eriksson, J. E.; Faklaris, O. et al.; Fernandez-Rodriguez, J.; Ferrand, A.; Gelman, L.; Gheisari, A.; Hartmann, H.; Kukat, C.; Laude, A.; Mitkovski, M.; Munck, S.; North, A. J.; Rasse, T. M.; Resch-Genger, U.; Schuetz, L. C.; Seitz, A.; Strambio-De-Castillia, C.; Swedlow, J. R.; Nitschke, R.: QUAREP-LiMi: a community endeavor to advance quality assessment and reproducibility in light microscopy. Nature Methods 18 (12), pp. 1424 - 1427 (2021)

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Edgar, J. M.; McGowan, E.; Chapple, K. J.; Möbius, W.; Lemgruber, L.; Insall, R. H.; Nave, K.-A.; Boullerne, A.: Río‐Hortega's drawings revisited with fluorescent protein defines a cytoplasm‐filled channel system of CNS myelin. Journal of Anatomy 239 (6), pp. 1241 - 1255 (2021)

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Kehl, A.; Hiller, M.; Hecker, F.; Tkach, I.; Dechert, S.; Bennati, M.; Meyer, A.: Resolution of chemical shift anisotropy in 19F ENDOR spectroscopy at 263 GHz/9.4 T. Journal of Magnetic Resonance 333, 107091 (2021)

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Lapolla, A.; Godec, A.: BetheSF V2: 3-point propagator and additional external potentials. Computer Physics Communications 269, 108131 (2021)

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18.

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Vieira, A. M.; Zahed, F.; Crispim, A. C.; de Souza Bento, E.; de Freitas Oliveira França, R.; Pinheiro, I. O.; Pardo, L. A.; Carvalho, B. M.: Production of levan from Bacillus subtilis var. natto and apoptotic effect on SH-SY5Y neuroblastoma cells. Carbohydrate Polymers 273, 118613 (2021)

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Henneberg, F.; Chari, A.: Chromatography-free purification strategies for large biological macromolecular complexes involving fractionated PEG precipitation and density gradients. Life 11, 1289 (2021)

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20.

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Henneberg, F.; Chari, A.: Chromatography-free purification strategies for large biological macromolecular complexes involving fractionated PEG precipitation and density gradients. Life 11 (12), 1289 (2021)

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21.

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Brüser, C.; Keller-Findeisen, J.; Jakobs, S.: The TFAM-to-mtDNA ratio defines inner-cellular nucleoid populations with distinct activity levels. Cell Reports 37 (8), 110000 (2021)

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22.

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Güran, A.; Ji, Y.; Fang, P.; Pan, K.-T.; Urlaub, H.; Avkiran, M.; Lenz, C.: Quantitative analysis of the cardiac phosphoproteome in response to acute β-adrenergic receptor stimulation in vivo. International Journal of Molecular Sciences 22 (22), 12584 (2021)

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23.

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Gerasimaite, R.; Bucevicius, J.; Kiszka, K.; Schnorrenberg, S.; Kostiuk, G.; Koenen, T.; Lukinavičius, G.: Blinking fluorescent probes for tubulin nanoscopy in living and fixed cells. ACS Chemical Biology 16 (11), pp. 2130 - 2136 (2021)

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Fianu, I.; Chen, Y.; Dienemann, C.; Dybkov, O.; Linden, A.; Urlaub, H.; Cramer, P.: Structural basis of Integrator-mediated transcription regulation. Science 374 (6569), pp. 883 - 887 (2021)

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25.

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Cruz-Zaragoza, L. D.; Dennerlein, S.; Linden, A.; Yousefi, R.; Lavdovskaia, E.; Aich, A.; Falk, R. R.; Gomkale, R.; Schöndorf, T.; Bohnsack, M. T. et al.; Richter-Dennerlein, R.; Urlaub, H.; Rehling, P.: An in vitro system to silence mitochondrial gene expression. Cell 184 (23), pp. 5824 - 5837.e15 (2021)

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26.

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Butkevich, A. N.; Weber, M.; Cereceda Delgado, A.R.; Ostersehlt, L. M.; d'Este, E.; Hell, S. W.: Photoactivatable fluorescent dyes with hydrophilic caging groups and their use in multicolor nanoscopy. Journal of the American Chemical Society 143 (44), pp. 18388 - 18393 (2021)

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27.

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Orth, B.; Sander, B.; Möglich, A.; Diederichs, K.; Eilers, M.; Lorenz, S.: Identification of an atypical interaction site in the BTB domain of the MYC-interacting zinc-finger protein 1. Structure 29 (11), pp. 1230 - 1240 (2021)

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28.

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Borodin, D.; Rahinov, I.; Galparsoro, O.; Fingerhut, J.; Schwarzer, M.; Golibrzuch, K.; Skoulatakis, G.; Auerbach, D. J.; Kandratsenka, A.; Kitsopoulos, T. N. et al.; Wodtke, A. M.: Kinetics of NH3 desorption and diﬀusion on Pt: Implications for the Ostwald process. Journal of the American Chemical Society 143 (43), pp. 18305 - 18316 (2021)

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29.

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Schiemann, O.; Heubach, C. A.; Abdullin, D.; Ackermann, K.; Azarkh, M.; Bagryanskaya, E. G.; Drescher, M.; Endeward, B.; Freed, J. H.; Galazzo, L. et al.; Goldfarb, D.; Hett, T.; Hofer, L. E.; Ibáñez, L. F.; Hustedt, E. J.; Kucher, S.; Kuprov, I.; Lovett, J. E.; Meyer, A.; Ruthstein, S.; Saxena, S.; Stoll, S.; Timmel, C. R.; Valentin, M. D.; Mchaourab, H. S.; Prisner, T. F.; Bode, B. E.; Bordignon, E.; Bennati, M.; Jeschke, G.: Benchmark test and guidelines for DEER/PELDOR experiments on nitroxide-labeled biomolecules. Journal of the American Chemical Society 143 (43), pp. 17875 - 17890 (2021)

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30.

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Zayko, S.; Kfir, O.; Heigl, M.; Lohmann, M.; Sivis, M.; Albrecht, M.; Ropers, C.: Ultrafast high-harmonic nanoscopy of magnetization dynamics. Nature Communications 12, 6337 (2021)

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31.

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Bodenhausen, G.; Ernst, M.; Griesinger, C.; Keller, T.; Kessler, H.; Meier, B.; Wokaun, A.: Richard Ernst (1933–2021). Angewandte Chemie International Edition 60 (45), pp. 23944 - 23945 (2021)

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32.

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Dauer née Joppe, K.; Tatenhorst, L.; Caldi Gomes, L.; Zhang, S.; Parvaz, M.; Carboni, E.; Roser, A.-E.; El DeBakey, H.; Bähr, M.; Vogel-Mikuš, K. et al.; Ip, C. W.; Becker, S.; Zweckstetter, M.; Lingor, P.: Brain iron enrichment attenuates α-synuclein spreading after injection of preformed fibrils. Journal of Neurochemistry 159 (3), pp. 554 - 573 (2021)

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33.

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Ni, G.; Zeng, J.; Revez, J.A.; Wang, Y.; Zheng, Z.; Ge, T.; Restuadi, R.; Kiewa, J.; Nyholt, D.R.; Coleman, J.R.I. et al.; Smoller, J.W.; Schizophrenia Working Group of the Psychiatric Genomics Consortium; Ehrenreich, H.; Major Depressive Disorder Working Group of the Psychiatric Genomics Consortium; Yang, J.; Visscher, P. M.; Wray, N. R.: A comparison of ten polygenic score methods for psychiatric disorders applied across multiple cohorts. Biological Psychiatry 90 (9), pp. 611 - 620 (2021)

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Reinhardt, M.; Grubmüller, H.: Small-sample limit of the Bennett acceptance ratio method and the variationally derived intermediates. Physical Review E 104 (5), 054133 (2021)

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35.

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Berghoff, S. A.; Spieth, L.; Sun, T.; Hosang, L.; Depp, C.; Sasmita, A. O.; Vasileva, M. H.; Scholz, P.; Zhao, Y.; Krüger, D. et al.; Wichert, S.; Brown, E. R.; Michail, K.; Nave, K.-A.; Bonn, S.; Odoardi, F.; Rossner, M.; Ischebeck, T.; Edgar, J. M.; Saher, G.: Neuronal cholesterol synthesis is essential for repair of chronically demyelinated lesions in mice. Cell Reports 37 (4), 109889 (2021)

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36.

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Lohner, P.; Zmyslia, M.; Thurn, J.; Pape, J. K.; Gerasimaite, R.; Keller-Findeisen, J.; Groeer, S.; Deuringer, B.; Süss, R.; Walther, A. et al.; Hell, S. W.; Lukinavičius, G.; Hugel, T.; Jessen-Trefzer, C.: Inside a shell – organometallic catalysis inside encapsulin nanoreactors. Angewandte Chemie International Edition 133 (44), pp. 24028 - 24034 (2021)

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37.

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Aquino, G. R. R.; Hackert, P.; Krogh, N.; Pan, K. T.; Jaafar, M.; Henras, A. K.; Nielsen, H.; Urlaub, H.; Bohnsack, K. E.; Bohnsack, M. T.: The RNA helicase Dbp7 promotes domain V/VI compaction and stabilization of inter-domain interactions during early 60S assembly. Nature Communications 12, 6152 (2021)

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38.

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Kokic, G.; Wagner, F. R.; Chernev, A.; Urlaub, H.; Cramer, P.: Structural basis of human transcription–DNA repair coupling. Nature 598 (7880), pp. 368 - 372 (2021)

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39.

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Vemulapalli, S. P.; Becker, S.; Griesinger, C.; Rezaei-Ghaleh, N.: Combined high-pressure and multiquantum NMR and molecular simulation propose a role for N-terminal salt bridges in amyloid-beta. The Journal of Physical Chemistry Letters 12 (40), pp. 9933 - 9939 (2021)

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40.

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Aibara, S.; Dienemann, C.; Cramer, P.: Structure of an inactive RNA polymerase II dimer. Nucleic Acids Research 49 (18), pp. 10747 - 10755 (2021)

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41.

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Petrychenko, V.; Peng, B. Z.; Schwarzer, A. C. d. A. P.; Peske, F.; Rodnina, M. V.; Fischer, N.: Structural mechanism of GTPase-powered ribosome-tRNA movement. Nature Communications 12 (1), 5933 (2021)

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42.

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Bergner, C. G.; Genc, N.; Hametner, S.; Franz, J.; van der Meer, F.; Mitkovski, M.; Weber, M. S.; Stoltenburg-Didinger, G.; Kühl, J.-S.; Köhler, W. et al.; Brück, W.; Gärtner, J.; Stadelmann, C.: Concurrent axon and myelin destruction differentiates X-linked adrenoleukodystrophy from multiple sclerosis. Glia 69 (10), pp. 2362 - 2377 (2021)

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43.

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García-Martínez, J.; Medina, D. A.; Bellvís, P.; Sun, M.; Cramer, P.; Chávez, S.; Pérez-Ortín, J. E.: The total mRNA concentration buffering system in yeast is global rather than gene-specific. RNA 27 (10), pp. 1281 - 1290 (2021)

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Güttler, T.; Aksu, M.; Dickmanns, A.; Stegmann, K. M.; Gregor, K.; Rees, R.; Taxer, W.; Rymarenko, O.; Schünemann, J.; Dienemann, C. et al.; Gunkel, P.; Mussil, B.; Krull, J.; Teichmann, U.; Groß, U.; Cordes, V.; Dobbelstein, M.; Görlich, D.: Neutralization of SARS-CoV-2 by highly potent, hyperthermostable, and mutation-tolerant nanobodies. EMBO Journal 40 (19), e107985 (2021)

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45.

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Nelson, G.; Boehm, U.; Bagley, S.; Bajcsy, P.; Bischof, J.; Brown, C. M.; Dauphin, A.; Dobbie, I. M.; Eriksson, J. E.; Faklaris, O. et al.; Fernandez-Rodriguez, J.; Ferrand, A.; Gelman, L.; Gheisari, A.; Hartmann, H.; Kukat, C.; Laude, A.; Mitkovski, M.; Munck, S.; North, A. J.; Rasse, T. M.; Resch-Genger, U.; Schuetz, L. C.; Seitz, A.; Strambio-De-Castillia, C.; Swedlow, J. R.; Alexopoulos, I.; Aumayr, K.; Avilov, S.; Bakker, G. J.; Bammann, R. R.; Bassi, A.; Beckert, H.; Beer, S.; Belyaev, Y.; Bierwagen, J.; Birngruber, K. A.; Bosch, M.; Breitlow, J.; Cameron, L. A.; Chalfoun, J.; Chambers, J. J.; Chen, C. L.; Conde-Sousa, E.; Corbett, A. D.; Cordelieres, F. P.; Nery, E. D.; Dietzel, R.; Eismann, F.; Fazeli, E.; Felscher, A.; Fried, H.; Gaudreault, N.; Goh, W. I.; Guilbert, T.; Hadleigh, R.; Hemmerich, P.; Holst, G. A.; Itano, M. S.; Jaffe, C. B.; Jambor, H. K.; Jarvis, S. C.; Keppler, A.; Kirchenbuechler, D.; Kirchner, M.; Kobayashi, N.; Krens, G.; Kunis, S.; Lacoste, J.; Marcello, M.; Martins, G. G.; Metcalf, D. J.; Mitchell, C. A.; Moore, J.; Mueller, T.; Nelson, M. S.; Ogg, S.; Onami, S.; Palmer, A. L.; Paul-Gilloteaux, P.; Pimentel, J. A.; Plantard, L.; Podder, S.; Rexhepaj, E.; Royon, A.; Saari, M. A.; Schapman, D.; Schoonderwoert, V.; Schroth-Diez, B.; Schwartz, S.; Shaw, M.; Spitaler, M.; Stoeckl, M. T.; Sudar, D.; Teillon, J.; Terjung, S.; Thuenauer, R.; Wilms, C. D.; Wright, G. D.; Nitschke, R.: QUAREP-LiMi: A community-driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy. Journal of Microscopy 284 (1), pp. 56 - 73 (2021)

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46.

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Yalunin, S. V.; Feist, A.; Ropers, C.: Tailored high-contrast attosecond electron pulses for coherent excitation and scattering. Physical Review Research 3 (3), L032036 (2021)

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47.

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Zhang, R.; Mirdita, M.; Levy Karin, E.; Norroy, C.; Galiez, C.; Söding, J.: SpacePHARER: sensitive identification of phages from CRISPR spacers in prokaryotic hosts. Bioinformatics 37 (19), pp. 3364 - 3366 (2021)

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48.

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Binotti, B.; Jahn, R.; Pérez-Lara, A.: An overview of the synaptic vesicle lipid composition. Archives of Biochemistry and Biophysics 709, 108966 (2021)

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49.

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Gomkale, R.; Linden, A.; Neumann, P.; Schendzielorz, A. B.; Stoldt, S.; Dybkov, O.; Kilisch, M.; Schulz, C.; Cruz-Zaragoza, L. D.; Schwappach, B. et al.; Ficner, R.; Jakobs, S.; Urlaub, H.; Rehling, P.: Mapping protein interactions in the active TOM-TIM23 supercomplex. Nature Communications 12, 5715 (2021)

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50.

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Blom, K.; Godec, A.: Criticality in cell adhesion. Physical Review X 11 (3), 031067 (2021)

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