Publications

Max Planck Institute for Multidisciplinary Sciences

Journal Article (12844)

51.

Journal Article

Schaeper, J. J.; Kampshoff, C. A.; Wolf, B. J.; Roos, L.; Michanski, S.; Ruhwedel, T.; Eckermann, M.; Meyer, A.; Jeschke, M.; Wichmann, C. et al.; Moser, T.; Salditt, T.: 3D virtual histology of rodent and primate cochleae with multi-scale phase-contrast X-ray tomography. Scientific Reports 15, 7933 (2025)

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52.

Journal Article

Sala, F. A.; Ditter, K.; Dybkov, O.; Urlaub, H.; Hillen, H. S.: Structural basis of Nipah virus RNA synthesis. Nature Communications 16, 2261 (2025)

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supplementary-material

53.

Journal Article

Dieball, C.; Godec, A.: Perspective: Time irreversibility in systems observed at coarse resolution. The Journal of Chemical Physics 162, 090901 (2025)

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54.

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Papantonis, A.; Oudelaar, A. M.: Mechanisms of Enhancer-Mediated Gene Activation in the Context of the 3D Genome. Annual Review of Genomics and Human Genetics 26, pp. 4.1 - 4.26 (2025)

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55.

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Barreira-Silva, P.; Lian, Y.; Kaufmann, S. H. E.; Moura-Alves, P.: The role of the AHR in host–pathogen interactions. Nature Reviews Immunology 25, pp. 178 - 194 (2025)

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56.

Journal Article

Faul, N.; Chen, S.-Y.; Lamberz, C.; Bruckner, M.; Dienemann, C.; Burg, T. P.: Cryo-iCLEM: Cryo correlative light and electron microscopy with immersion objectives. Journal of Structural Biology 217 (1), 108179 (2025)

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57.

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Fries, L. M.; Moll, D.; Mei, R.; Hune, T. L. K.; Elsaßer, J.; Glöggler, S.: Assessing a hyperpolarized [1-¹³C]-labeled alanine derivative enhanced via parahydrogen for in vivo studies. Journal of Magnetic Resonance Open 22, 100183 (2025)

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58.

Journal Article

Furukawa, K.; Ikoma, Y.; Niino, Y.; Hiraoka, Y.; Tanaka, K.; Miyawaki, A.; Hirrlinger, J.; Matsui, K.: Dynamics of Neuronal and Astrocytic Energy Molecules in Epilepsy. Journal of Neurochemistry 169 (3), e70044 (2025)

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59.

Journal Article

Hensel, T. A.; Wirth, J. O.; Schwarz, O. L.; Hell, S. W.: Diffraction minima resolve point scatterers at few hundredths of the wavelength. Nature Physics 21, pp. 412 - 420 (2025)

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60.

Journal Article

Kim, W.; Mirdita, M.; Karin, E. L.; Gilchrist, C.; Schweke, H.; Söding, J.; Levy, E.; Steinegger, M.: Rapid and sensitive protein complex alignment with Foldseek-Multimer. Nature Methods 22, pp. 469 - 472 (2025)

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61.

Journal Article

Macarrón-Palacios, V.; Hubrich, J.; do Rego Barros Fernandes Lima, M. A.; Metzendorf, N. G.; Kneilmann, S.; Trapp, M.; Acuna, C.; Patrizi, A.; D’Este, E.; Kilimann, M. W.: Paralemmin-1 controls the nanoarchitecture of the neuronal submembrane cytoskeleton. Science Advances 11 (10), eadt3724 (2025)

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62.

Journal Article

Putko, P.; Romero, J. A.; Pantoja, C. F.; Zweckstetter, M.; Kazimierczuk, K.; Zawadzka-Kazimierczuk, A.: Using temperature coefficients to support resonance assignment of intrinsically disordered proteins. Journal of Biomolecular NMR 79, pp. 59 - 65 (2025)

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63.

Journal Article

Fendler, N. L.; Ly, J.; Welp, L. M.; Lu, D.; Schulte, F.; Urlaub, H.; Vos, S. M.: Identification and characterization of a human MORC2 DNA binding region that is required for gene silencing. Nucleic Acids Research 53 (4), gkae1273 (2025)

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64.

Journal Article

Reilly, C. S.; Auerbach, D. J.; Zhang, L.; Guo, H.; Beck, R. D.: Quantum interference observed in state-resolved molecule-surface scattering. Science 387 (6737), pp. 962 - 967 (2025)

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65.

Journal Article

Meling, A.; Yamin, T.; Kandratsenka, A.; Sharoni, A.; Schäfer, T.; Rahinov, I.: Vibrational Energy Transfer upon the Collision of NO with VO₂ Thin Films across the Insulator-to-Metal Transition. The Journal of Physical Chemistry A 129 (8), pp. 1993 - 2005 (2025)

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66.

Journal Article

Sailer, A.-L.; Brendel, J.; Chernev, A.; König, S.; Bischler, T.; Gräfenhan, T.; Urlaub, H.; Gophna, U.; Marchfelder, A.: Internal in-frame translation generates Cas11b, which is important for effective interference in an archaeal CRISPR-Cas system. Frontiers in Microbiology 16, 1543464 (2025)

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67.

Journal Article

Ahrens, F. M.; do Prado, P. F.V.; Hillen, H. S.; Pfannschmidt, T.: The plastid-encoded RNA polymerase of plant chloroplasts. Trends in Plant Science (2025)

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68.

Journal Article

Briand, E.; Kohnke, B.; Kutzner, C.; Grubmüller, H.: Constant pH Simulation with FMM Electrostatics in GROMACS. (A) Design and Applications. Journal of Chemical Theory and Computation 21 (4), pp. 1762 - 1786 (2025)

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69.

Journal Article

Flores-León, M.; Outeiro, T. F.: Expanding our understanding of synucleinopathies: proteinopathy, proteinopenia, and lipidopathy. The FEBS Journal (2025)

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70.

Journal Article

Kohnke, B.; Briand, E.; Kutzner, C.; Grubmüller, H.: Constant pH Simulation with FMM Electrostatics in GROMACS. (B) GPU Accelerated Hamiltonian Interpolation. Journal of Chemical Theory and Computation 21 (4), pp. 1787 - 1804 (2025)

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71.

Journal Article

Singh, M.; Leddy, S. M.; Iñiguez, L. P.; Bendall, M. L.; Nixon, D. F.; Feschotte, C.: Transposable elements may enhance antiviral resistance in HIV-1 elite controllers. Genome Biology 26, 28 (2025)

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72.

Journal Article

Valiente, P. A.; Guerra, Y.; Wolf, M. G.; Pascual, I.; Rudiño-Piñera, E.; Florent, I.; Pons, T.; Groenhof, G.: Discovery of a Noncompetitive Open-Flap Selective Inhibitor of Plasmepsin II with Antiplasmodial Activity. Journal of Chemical Information and Modeling 65 (4), pp. 2038 - 2051 (2025)

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73.

Journal Article

Lohrberg, M.; Mortensen, L. S.; Thomas, C.; Fries, F.; van der Meer, F.; Götz, A.; Landt, C.; Rhee, H. J.; Rhee, J. S.; Gómez-Varela, D. et al.; Schmidt, M.; Möbius, W.; Ruhwedel, T.; Pardo, L. A.; Remling, L.; Kramann, N.; Wrzos, C.; Bahn, E.; Stadelmann, C.; Barrantes-Freer, A.: Astroglial modulation of synaptic function in the non-demyelinated cerebellar cortex is dependent on MyD88 signaling in a model of toxic demyelination. Journal of Neuroinflammation 22, 47 (2025)

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74.

Journal Article

Mann, W.; Erregger, B.; Hennig, R. M.; Clemens, J.: Resonant song recognition and the evolution of acoustic communication in crickets. iScience 28, 111695 (2025)

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75.

Journal Article

Witkowska, J.; Giżyńska, M.; Karpowicz, P.; Sowik, D.; Trepczyk, K.; Henneberg, F.; Chari, A.; Giełdoń, A.; Pierzynowska, K.; Gaffke, L. et al.; Węgrzyn, G.; Jankowska, E.: Blm10-Based Compounds Add to the Knowledge of How Allosteric Modulators Influence Human 20S Proteasome. ACS Chemical Biology 20 (2), pp. 266 - 280 (2025)

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76.

Journal Article

Jennrich, J.; Farkas, Á.; Urlaub, H.; Schwappach, B.; Bohnsack, K. E.: The formation of chaperone-rich GET bodies depends on the tetratricopeptide repeat region of Sgt2 and is reversed by NADH. Journal of Cell Science 138 (6), jcs263616 (2025)

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77.

Journal Article

Shi, L.; Schröder, M.; Meyer, H.-D.; Peláez, D.; Wodtke, A. M.; Golibrzuch, K.; Schönemann, A.-M.; Kandratsenka, A.; Gatti, F.: Full Quantum Dynamics Study for H Atom Scattering from Graphen^e. The Journal of Physical Chemistry A 129 (7), pp. 1896 - 1907 (2025)

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78.

Journal Article

Coles, N. P.; Elsheikh, S.; Quesnel, A.; Butler, L.; Jennings, C.; Tarzi, C.; Achadu, O. J.; Islam, M.; Kalesh, K.; Occhipinti, A. et al.; Angione, C.; Marles-Wright, J.; Koss, D. J.; Thomas, A. J.; Outeiro, T. F.; Filippou, P. S.; Khundakar, A. A.: Molecular Insights into α-Synuclein Fibrillation: A Raman Spectroscopy and Machine Learning Approach. ACS Chemical Neuroscience 16 (4), pp. 687 - 698 (2025)

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79.

Journal Article

Lenjer, M.; Wili, N.; Hecker, F.; Bennati, M.: Electron spin dynamics during microwave pulses studied by 94 GHz chirp and phase-modulated EPR experiments. Magnetic Resonance 6 (1), pp. 43 - 75 (2025)

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80.

Journal Article

Sagar, M. M. R.; D'Amico, L.; Longo, E.; Persson, I. M.; Deyhle, R.; Tromba, G.; Bayat, S.; Alves, F.; Dullin, C.: Air artifact suppression in phase contrast micro-CT using conditional generative adversarial networks. Journal of Synchrotron Radiation (accepted)

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81.

Journal Article

Vogelsang, J.; Mikkelsen, A.; Ropers, C.; Gaida, J. H.; Garg, M.; Kern, K.; Miao, J.; Schultze, M.; Ossiander, M.: Attosecond microscopy —Advances and outlook. EPL 149, 36001 (2025)

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82.

Journal Article

Kauffmann, P.; Wolfer, S.; Behrens, C.; Schlosser, P.; Dullin, C.; Schirmer, U.; Liefeith, K.; Schliephake, H.: Effect of Sequential vs. Simultaneous Dual Growth Factor Release from Structured Heparin-Poly-Electrolyte Multilayer Coatings on Peri-Implant Bone Formation and Angiogenesis in Pig Mandibles. Journal of Functional Biomaterials 16 (2), 67 (2025)

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83.

Journal Article

Kutzner, C.; Miletić, V.; Palacio Rodríguez, K.; Rampp, M.; Hummer, G.; de Groot, B. L.; Grubmüller, H.: Scaling of the GROMACS Molecular Dynamics Code to 65k CPU Cores on an HPC Cluster. Journal of Computational Chemistry 46 (5), e70059 (2025)

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84.

Journal Article

Dieball, C.; Mohebi Satalsari, Y.; Zuccolotto-Bernez, A. B.; Egelhaaf, S. U.; Escobedo-Sánchez, M. A.; Godec, A.: Precisely controlled colloids: a playground for path-wise non-equilibrium physics. Soft Matter 21 (11), pp. 2170 - 2181 (2025)

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85.

Journal Article

Dierksen, F.; Geibel, J. S.; Albrecht, J.; Hofer, S.; Dechent, P.; Hesse, A. C.; Frahm, J.; Bähr, M.; Koch, J. C.; Liman, J. et al.; Maier, I. L.: T1-relaxation times along the corticospinal tract as a diagnostic marker in patients with amyotrophic lateral sclerosis. Frontiers in Neuroimaging 4, 1549727 (2025)

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86.

Journal Article

Blom, K.; Thiele, U.; Godec, A.: Local order controls the onset of oscillations in the nonreciprocal Ising model. Physical Review E 111 (2), 024207 (2025)

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87.

Journal Article

Neben, M. C.; Wegerich, N.; Al Said, T. A.; Thompson, R. R.; Demeshko, S.; Dollberg, K.; Tkach, I.; Van Trieste, G. P.; Verplancke, H.; von Hänisch, C. et al.; Holthausen, M. C.; Powers, D. C.; Schnegg, A.; Schneider, S.: Transient Triplet Metallopnictinidenes M–Pn (M = Pd^II, Pt^II; Pn = P, As, Sb): Characterization and Dimerization. Journal of the American Chemical Society 147 (6), pp. 5330 - 5339 (2025)

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88.

Journal Article

Lysakovskaia, K.; Devadas, A.; Schwalb, B.; Lidschreiber, M.; Cramer, P.: Promoter-proximal RNA polymerase II termination regulates transcription during human cell type transition. Nature Structural & Molecular Biology (2025)

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supplementary-material

89.

Journal Article

Outeiro, T. F.; Höglinger, G.; Lang, A. E.; Vieira, T. C. R. G.: Protein misfolding: understanding biology to classify and treat synucleinopathies. Journal of Neural Transmission (2025)

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90.

Journal Article

Zhang, L.; Nitz, F.; Borodin, D.; Wodtke, A. M.; Guo, H.: Ring Polymer Molecular Dynamics Rates for Hydrogen Recombinative Desorption on Pt(111). Precision Chemistry (2025)

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91.

Journal Article

Duque, M.; Chen, A. B.; Hsu, E.; Narayan, S.; Rymbek, A.; Begum, S.; Saher, G.; Cohen, A. E.; Olson, D. E.; Li, Y. et al.; Prober, D. A.; Bergles, D. E.; Fishman, M. C.; Engert, F.; Ahrens, M. B.: Ketamine induces plasticity in a norepinephrine-astroglial circuit to promote behavioral perseverance. Neuron 113 (3), pp. 426 - 443.e5 (2025)

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92.

Journal Article

Kallos, I. S.; Benfreha, K.; Golibrzuch, K.; Zhao, H.; Bar, I.; Schäfer, T.; Rahinov, I.; Wodtke, A. M.; Baraban, J. H.: Resonance-enhanced multiphoton ionization detection of vibrationally excited O₂. The Journal of Chemical Physics 162 (5), 051103 (2025)

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93.

Journal Article

Sucre, O.; Glöggler, S.: Optimization Method Based on Zonal Harmonics for Axially Symmetric Magnets. IEEE Transactions on Magnetics 61 (2), 5100109 (2025)

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94.

Journal Article

Bochert, D.; Hofer, S.; Dechent, P.; Frahm, J.; Bähr, M.; Liman, J.; Maier, I.: Blood Flow Velocities as Determined by Real‐Time Phase‐Contrast MRI in Patients with Carotid Artery Stenosis. Journal of Neuroimaging 35 (1), e70016 (2025)

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95.

Journal Article

Dullin, C.; Alves, F.: Einsatz von künstlicher Intelligenz in der Endoskopie zur Analyse von Gewebebiopsien. Die Gastroenterologie 20, pp. 44 - 53 (2025)

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96.

Journal Article

Ferreira, N.; Kulkarni, A.; Agorku, D.; Midelashvili, T.; Hardt, O.; Legler, T. J.; Ströbel, P.; Conradi, L.-C.; Alves, F.; Ramos Gomes, F. et al.; Markus, M. A.: OrganoIDNet: a deep learning tool for identification of therapeutic effects in PDAC organoid-PBMC co-cultures from time-resolved imaging data. Cellular Oncology 48, pp. 101 - 122 (2025)

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97.

Journal Article

Gąsiorowski, L.: Evidence for Multiple Independent Expansions of Fox Gene Families Within Flatworms. Journal of Molecular Evolution 93, pp. 124 - 135 (2025)

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98.

Journal Article

Hehlert, P.; Effertz, T.; Gu, R.-X.; Nadrowski, B.; Geurten, B. R. H.; Beutner, D.; de Groot, B. L.; Göpfert, M. C.: NOMPC ion channel hinge forms a gating spring that initiates mechanosensation. Nature Neuroscience 28, pp. 259 - 267 (2025)

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99.

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Höltje, M.; Wolkowicz, A.; Brunk, I.; Baron, J.; Ahnert‐Hilger, G.: Gα_o1 and Gα_o1/Gα_o2 deletion differentially affect hippocampal mossy fiber tract anatomy and neuronal morphogenesis. Journal of Neurochemistry 169 (2), e16248 (2025)

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100.

Journal Article

Kauffmann, P.; Wolfer, S.; Behrens, C.; Schlosser, P.; Dullin, C.; Schirmer, U.; Liefeith, K.; Schliephake, H.: Dual growth factor release from collagen based polyelectrolyte multilayer films on Ti-implant enhances periimplant bone formation and angiogenic activity. Biomaterials Advances (accepted)

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