Publications

Max Planck Institute for Multidisciplinary Sciences

Journal Article (12861)

51.

Journal Article

Wodtke, A.: Looking Backward and Forward. The Journal of Physical Chemistry C 129 (13), pp. 6062 - 6073 (2025)

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52.

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Garg, V.; Möbius, W.; Heinrich, R.; Ruhwedel, T.; Perera, R. P.; Scholz, P.; Ischebeck, T.; Salinas, G.; Dullin, C.; Göpfert, M. C. et al.; Engelmann, J.; Dosch, R.; Geurten, B. R. H.: Patient-specific mutation of a contact site protein Tomm70 causes neurodegeneration in a zebrafish model. Disease Models & Mechanisms 18 (4), dmm052029 (2025)

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53.

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Jain, N.; Chacinska, A.; Rehling, P.: Understanding mitochondrial protein import: a revised model of the presequence translocase. Trends in Biochemical Sciences (2025)

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54.

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Peralta, M. A.; Negro, M. F.; Aguirre, E. N. B.; Santi, M. D.; Ortega, M. G.: Antifungal and Anti-tyrosinase Activities of Dalea Species Extracts: Differential Biological Effects and Their Correlation with Phytochemical Content via UPLC-MS/MS Profiling. Revista Brasileira de Farmacognosia (2025)

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55.

Journal Article

Singh, P.; Brand, J. N.; Schärer, L.: Evolution and co-evolution of the suck behaviour, a postcopulatory female resistance trait that manipulates received ejaculate. BMC Biology 23, 87 (2025)

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56.

Journal Article

Sinha, S.; Wodtke, A. M.; Saalfrank, P.: When carbon monoxide goes “upside down”: vibrational signatures of CO at NaCl(100) from ab initio molecular dynamics. Physical Chemistry Chemical Physics 27, pp. 7929 - 7942 (2025)

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57.

Journal Article

Domröse, T.; da Camara Silva, L.; Ropers, C.: Megahertz cycling of ultrafast structural dynamics enabled by nanosecond thermal dissipation. Applied Physics Letters 126 (12), 123104 (2025)

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58.

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Daguano Gastaldi, V.; Hindermann, M.; Wilke, J. B. H.; Ronnenberg, A.; Arinrad, S.; Kraus, S.; Wildenburg, A.-F.; Ntolkeras, A.; Provost, M. J.; Ye, L. et al.; Curto, Y.; Cortés-Silva, J.-A.; Butt, U. J.; Nave, K.-A.; Miskowiak, K. W.; Ehrenreich, H.: A comprehensive and standardized pipeline for automated profiling of higher cognition in mice. Cell Reports Methods 5 (3), 101011 (2025)

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59.

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Lin, K.-H.; Ranjan, M.; Lipstein, N.; Brose, N.; Neher, E.; Taschenberger, H.: Number and relative abundance of synaptic vesicles in functionally distinct priming states determine synaptic strength and short‐term plasticity. The Journal of Physiology (2025)

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60.

Journal Article

Koss, D. J.; Todd, O.; Menon, H.; Anderson, Z.; Yang, T.; Findlay, L.; Graham, B.; Palmowski, P.; Porter, A.; Morrice, N. et al.; Walker, L.; Attems, J.; Ghanem, S. S.; El-Agnaf, O.; LeBeau, F. E.; Erskine, D.; Outeiro, T. F.: A reciprocal relationship between markers of genomic DNA damage and alpha-synuclein pathology in dementia with Lewy bodies. Molecular Neurodegeneration 20, 34 (2025)

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61.

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Singh, S.; Gapsys, V.; Aldeghi, M.; Schaller, D.; Rangwala, A. M.; White, J. B.; Bluck, J. P.; Scheen, J.; Glass, W. G.; Guo, J. et al.; Hayat, S.; de Groot, B. L.; Volkamer, A.; Christ, C. D.; Seeliger, M. A.; Chodera, J. D.: Prospective Evaluation of Structure-Based Simulations Reveal Their Ability to Predict the Impact of Kinase Mutations on Inhibitor Binding. The Journal of Physical Chemistry B 129 (11), pp. 2882 - 2902 (2025)

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62.

Journal Article

Laurent, C.; Poncet, G.; Herskovits, T.; Alves de Sousa, R.; Le Corre, L.; Al-Azzani, M.; Koenig, A.; Birman, S.; Outeiro, T. F.; Mansuy, D. et al.; Dairou, J.: Inhibition of the Parkinson’s Disease-Related Protein DJ-1 by Endogenous Neurotoxins of the 1,2,3,4-Tetrahydroisoquinoline Family. ACS Chemical Neuroscience 16 (6), pp. 1034 - 1042 (2025)

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63.

Journal Article

Sasmita, A. O.; Ong, E. C.; Nazarenko, T.; Mao, S.; Komarek, L.; Thalmann, M.; Hantakova, V.; Spieth, L.; Berghoff, S. A.; Barr, H. J. et al.; Hingerl, M.; Börensen, F.; Hirrlinger, J.; Simons, M.; Stevens, B.; Depp, C.; Nave, K.-A.: Parental origin of transgene modulates amyloid-β plaque burden in the 5xFAD mouse model of Alzheimer’s disease. Neuron 113 (6), pp. 838 - 846.e4 (2025)

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64.

Journal Article

Jooss, C.; Seibt, M.; Wenderoth, M.; Bünermann, O.; Bunjes, O.; Domröse, T.; Eckel, C.; Falorsi, F.; Flathmann, C.; Kolek Martinez de Azagra, M. et al.; Krüger, M.; Lindner, J.; Meyer, T.; Ropers, C.; Ross, U.; Rossnagel, K.; Lalithambika, S. S. N.; Techert, S.; Traeger, G. A.; Volkert, C.; Weitz, R. T.; Wodtke, A. M.: Advancing Energy Materials by In Situ Atomic Scale Methods. Advanced Energy Materials 15 (11), 2404280 (2025)

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65.

Journal Article

Thirumalai, A.; Henseler, J.; Enayati, M.; Kusch, K.; Hessler, R.; Moser, T.; Huet, A. T.: Improved optogenetic modification of spiral ganglion neurons for future optical cochlear implants. Theranostics 15 (10), pp. 4270 - 4286 (2025)

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66.

Journal Article

Blom, K.; Makarov, D. E.; Godec, A.: Hallmarks of deception in asset-exchange models. Physical Review Research 7, 013279 (2025)

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67.

Journal Article

Ferrari, D. P.; Cobanoglu, O.; Sayedipour, S.; Luna, O.; Ferkel, S. A. M.; Agorku, D.; Perez, Y.; Cruz, L. J.; Albericio, F.; Trottein, F. et al.; Alves, F.; Markus, M. A.; Ramos Gomes, F.: Anti-Tumor Efficacy of a Mesothelin-Based Nanovaccine in a KPC Orthotopic Mouse Model of Pancreatic Cancer. Vaccines 13 (3), 314 (2025)

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68.

Journal Article

Kabinger, F.; Doze, V.; Schmitzová, J.; Lidschreiber, M.; Dienemann, C.; Cramer, P.: Structural basis of SARS-CoV-2 polymerase inhibition by nonnucleoside inhibitor HeE1-2Tyr. Proceedings of the National Academy of Sciences of the United States of America 122 (10), e2419854122 (2025)

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69.

Journal Article

Schaeper, J. J.; Kampshoff, C. A.; Wolf, B. J.; Roos, L.; Michanski, S.; Ruhwedel, T.; Eckermann, M.; Meyer, A.; Jeschke, M.; Wichmann, C. et al.; Moser, T.; Salditt, T.: 3D virtual histology of rodent and primate cochleae with multi-scale phase-contrast X-ray tomography. Scientific Reports 15, 7933 (2025)

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70.

Journal Article

Sala, F. A.; Ditter, K.; Dybkov, O.; Urlaub, H.; Hillen, H. S.: Structural basis of Nipah virus RNA synthesis. Nature Communications 16, 2261 (2025)

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supplementary-material

71.

Journal Article

Dieball, C.; Godec, A.: Perspective: Time irreversibility in systems observed at coarse resolution. The Journal of Chemical Physics 162, 090901 (2025)

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72.

Journal Article

Papantonis, A.; Oudelaar, A. M.: Mechanisms of Enhancer-Mediated Gene Activation in the Context of the 3D Genome. Annual Review of Genomics and Human Genetics 26, pp. 4.1 - 4.26 (2025)

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73.

Journal Article

Barreira-Silva, P.; Lian, Y.; Kaufmann, S. H. E.; Moura-Alves, P.: The role of the AHR in host–pathogen interactions. Nature Reviews Immunology 25, pp. 178 - 194 (2025)

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74.

Journal Article

Faul, N.; Chen, S.-Y.; Lamberz, C.; Bruckner, M.; Dienemann, C.; Burg, T. P.: Cryo-iCLEM: Cryo correlative light and electron microscopy with immersion objectives. Journal of Structural Biology 217 (1), 108179 (2025)

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75.

Journal Article

Fries, L. M.; Moll, D.; Mei, R.; Hune, T. L. K.; Elsaßer, J.; Glöggler, S.: Assessing a hyperpolarized [1-¹³C]-labeled alanine derivative enhanced via parahydrogen for in vivo studies. Journal of Magnetic Resonance Open 22, 100183 (2025)

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76.

Journal Article

Furukawa, K.; Ikoma, Y.; Niino, Y.; Hiraoka, Y.; Tanaka, K.; Miyawaki, A.; Hirrlinger, J.; Matsui, K.: Dynamics of Neuronal and Astrocytic Energy Molecules in Epilepsy. Journal of Neurochemistry 169 (3), e70044 (2025)

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77.

Journal Article

Hensel, T. A.; Wirth, J. O.; Schwarz, O. L.; Hell, S. W.: Diffraction minima resolve point scatterers at few hundredths of the wavelength. Nature Physics 21, pp. 412 - 420 (2025)

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78.

Journal Article

Kim, W.; Mirdita, M.; Karin, E. L.; Gilchrist, C.; Schweke, H.; Söding, J.; Levy, E.; Steinegger, M.: Rapid and sensitive protein complex alignment with Foldseek-Multimer. Nature Methods 22, pp. 469 - 472 (2025)

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79.

Journal Article

Macarrón-Palacios, V.; Hubrich, J.; do Rego Barros Fernandes Lima, M. A.; Metzendorf, N. G.; Kneilmann, S.; Trapp, M.; Acuna, C.; Patrizi, A.; D’Este, E.; Kilimann, M. W.: Paralemmin-1 controls the nanoarchitecture of the neuronal submembrane cytoskeleton. Science Advances 11 (10), eadt3724 (2025)

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80.

Journal Article

Putko, P.; Romero, J. A.; Pantoja, C. F.; Zweckstetter, M.; Kazimierczuk, K.; Zawadzka-Kazimierczuk, A.: Using temperature coefficients to support resonance assignment of intrinsically disordered proteins. Journal of Biomolecular NMR 79, pp. 59 - 65 (2025)

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81.

Journal Article

Fendler, N. L.; Ly, J.; Welp, L. M.; Lu, D.; Schulte, F.; Urlaub, H.; Vos, S. M.: Identification and characterization of a human MORC2 DNA binding region that is required for gene silencing. Nucleic Acids Research 53 (4), gkae1273 (2025)

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82.

Journal Article

Reilly, C. S.; Auerbach, D. J.; Zhang, L.; Guo, H.; Beck, R. D.: Quantum interference observed in state-resolved molecule-surface scattering. Science 387 (6737), pp. 962 - 967 (2025)

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83.

Journal Article

Meling, A.; Yamin, T.; Kandratsenka, A.; Sharoni, A.; Schäfer, T.; Rahinov, I.: Vibrational Energy Transfer upon the Collision of NO with VO₂ Thin Films across the Insulator-to-Metal Transition. The Journal of Physical Chemistry A 129 (8), pp. 1993 - 2005 (2025)

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84.

Journal Article

Sailer, A.-L.; Brendel, J.; Chernev, A.; König, S.; Bischler, T.; Gräfenhan, T.; Urlaub, H.; Gophna, U.; Marchfelder, A.: Internal in-frame translation generates Cas11b, which is important for effective interference in an archaeal CRISPR-Cas system. Frontiers in Microbiology 16, 1543464 (2025)

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85.

Journal Article

Ahrens, F. M.; do Prado, P. F.V.; Hillen, H. S.; Pfannschmidt, T.: The plastid-encoded RNA polymerase of plant chloroplasts. Trends in Plant Science (2025)

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86.

Journal Article

Briand, E.; Kohnke, B.; Kutzner, C.; Grubmüller, H.: Constant pH Simulation with FMM Electrostatics in GROMACS. (A) Design and Applications. Journal of Chemical Theory and Computation 21 (4), pp. 1762 - 1786 (2025)

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87.

Journal Article

Flores-León, M.; Outeiro, T. F.: Expanding our understanding of synucleinopathies: proteinopathy, proteinopenia, and lipidopathy. The FEBS Journal (2025)

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88.

Journal Article

Kohnke, B.; Briand, E.; Kutzner, C.; Grubmüller, H.: Constant pH Simulation with FMM Electrostatics in GROMACS. (B) GPU Accelerated Hamiltonian Interpolation. Journal of Chemical Theory and Computation 21 (4), pp. 1787 - 1804 (2025)

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89.

Journal Article

Singh, M.; Leddy, S. M.; Iñiguez, L. P.; Bendall, M. L.; Nixon, D. F.; Feschotte, C.: Transposable elements may enhance antiviral resistance in HIV-1 elite controllers. Genome Biology 26, 28 (2025)

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90.

Journal Article

Valiente, P. A.; Guerra, Y.; Wolf, M. G.; Pascual, I.; Rudiño-Piñera, E.; Florent, I.; Pons, T.; Groenhof, G.: Discovery of a Noncompetitive Open-Flap Selective Inhibitor of Plasmepsin II with Antiplasmodial Activity. Journal of Chemical Information and Modeling 65 (4), pp. 2038 - 2051 (2025)

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91.

Journal Article

Lohrberg, M.; Mortensen, L. S.; Thomas, C.; Fries, F.; van der Meer, F.; Götz, A.; Landt, C.; Rhee, H. J.; Rhee, J. S.; Gómez-Varela, D. et al.; Schmidt, M.; Möbius, W.; Ruhwedel, T.; Pardo, L. A.; Remling, L.; Kramann, N.; Wrzos, C.; Bahn, E.; Stadelmann, C.; Barrantes-Freer, A.: Astroglial modulation of synaptic function in the non-demyelinated cerebellar cortex is dependent on MyD88 signaling in a model of toxic demyelination. Journal of Neuroinflammation 22, 47 (2025)

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92.

Journal Article

Mann, W.; Erregger, B.; Hennig, R. M.; Clemens, J.: Resonant song recognition and the evolution of acoustic communication in crickets. iScience 28, 111695 (2025)

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93.

Journal Article

Witkowska, J.; Giżyńska, M.; Karpowicz, P.; Sowik, D.; Trepczyk, K.; Henneberg, F.; Chari, A.; Giełdoń, A.; Pierzynowska, K.; Gaffke, L. et al.; Węgrzyn, G.; Jankowska, E.: Blm10-Based Compounds Add to the Knowledge of How Allosteric Modulators Influence Human 20S Proteasome. ACS Chemical Biology 20 (2), pp. 266 - 280 (2025)

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94.

Journal Article

Jennrich, J.; Farkas, Á.; Urlaub, H.; Schwappach, B.; Bohnsack, K. E.: The formation of chaperone-rich GET bodies depends on the tetratricopeptide repeat region of Sgt2 and is reversed by NADH. Journal of Cell Science 138 (6), jcs263616 (2025)

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95.

Journal Article

Shi, L.; Schröder, M.; Meyer, H.-D.; Peláez, D.; Wodtke, A. M.; Golibrzuch, K.; Schönemann, A.-M.; Kandratsenka, A.; Gatti, F.: Full Quantum Dynamics Study for H Atom Scattering from Graphen^e. The Journal of Physical Chemistry A 129 (7), pp. 1896 - 1907 (2025)

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96.

Journal Article

Coles, N. P.; Elsheikh, S.; Quesnel, A.; Butler, L.; Jennings, C.; Tarzi, C.; Achadu, O. J.; Islam, M.; Kalesh, K.; Occhipinti, A. et al.; Angione, C.; Marles-Wright, J.; Koss, D. J.; Thomas, A. J.; Outeiro, T. F.; Filippou, P. S.; Khundakar, A. A.: Molecular Insights into α-Synuclein Fibrillation: A Raman Spectroscopy and Machine Learning Approach. ACS Chemical Neuroscience 16 (4), pp. 687 - 698 (2025)

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97.

Journal Article

Lenjer, M.; Wili, N.; Hecker, F.; Bennati, M.: Electron spin dynamics during microwave pulses studied by 94 GHz chirp and phase-modulated EPR experiments. Magnetic Resonance 6 (1), pp. 43 - 75 (2025)

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98.

Journal Article

Sagar, M. M. R.; D'Amico, L.; Longo, E.; Persson, I. M.; Deyhle, R.; Tromba, G.; Bayat, S.; Alves, F.; Dullin, C.: Air artifact suppression in phase contrast micro-CT using conditional generative adversarial networks. Journal of Synchrotron Radiation (accepted)

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99.

Journal Article

Vogelsang, J.; Mikkelsen, A.; Ropers, C.; Gaida, J. H.; Garg, M.; Kern, K.; Miao, J.; Schultze, M.; Ossiander, M.: Attosecond microscopy —Advances and outlook. EPL 149, 36001 (2025)

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100.

Journal Article

Kauffmann, P.; Wolfer, S.; Behrens, C.; Schlosser, P.; Dullin, C.; Schirmer, U.; Liefeith, K.; Schliephake, H.: Effect of Sequential vs. Simultaneous Dual Growth Factor Release from Structured Heparin-Poly-Electrolyte Multilayer Coatings on Peri-Implant Bone Formation and Angiogenesis in Pig Mandibles. Journal of Functional Biomaterials 16 (2), 67 (2025)

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