Publications
Journal Article (111)
1.
Journal Article
8 (15), eabj8633 (2022)
Cln5 represents a new type of cysteine-basedS-depalmitoylase linked to neurodegeneration. Science Advances 2.
Journal Article
18 (2), e9816 (2022)
Large-scale analysis of Drosophila core promoter function using synthetic promoters. Molecular Systems Biology 3.
Journal Article
37 (19), pp. 3364 - 3366 (2021)
SpacePHARER: sensitive identification of phages from CRISPR spacers in prokaryotic hosts. Bioinformatics 4.
Journal Article
37 (18), pp. 3029 - 3031 (2021)
Fast and sensitive taxonomic assignment to metagenomic contigs. Bioinformatics 5.
Journal Article
37, pp. i308 - i316 (2021)
Thermodynamic modeling reveals widespread multivalent binding by RNA-binding proteins. Bioinformatics 6.
Journal Article
37 (Suppl. 1), pp. i308 - i316 (2021)
Thermodynamic modeling reveals widespread multivalent binding by RNA-binding proteins. Bioinformatics 7.
Journal Article
22, 142 (2021)
Tejaas: reverse regression increases power for detecting trans-eQTLs. Genome Biology 8.
Journal Article
3 (2), lquab026 (2021)
Bayesian Markov models improve the prediction of binding motifs beyond first order. NAR: Genomics and Bioinformatics 9.
Journal Article
10, e65381 (2021)
Evidence for additive and synergistic action of mammalian enhancers during cell fate determination. eLife 10.
Journal Article
49 (D1), pp. D298 - D308 (2021)
DescribePROT: database of amino acid-level protein structure and function predictions. Nucleic Acids Research 11.
Journal Article
72 (1), e108 (2020)
Protein sequence analysis using the MPI Bioinformatics Toolkit. Current Protocols in Bioinformatics 12.
Journal Article
79 (6), p. 1066 (2020)
A high-throughput screen for transcription activation domains reveals their sequence features and permits prediction by deep learning (Correction). Molecular Cell 13.
Journal Article
78 (5), pp. 890 - 902.e6 (2020)
A high-throughput screen for transcription activation domains reveals their sequence features and permits prediction by deep learning. Molecular Cell 14.
Journal Article
8, 48 (2020)
MetaEuk—sensitive, high-throughput gene discovery, and annotation for large-scale eukaryotic metagenomics. Microbiome 15.
Journal Article
30 (1), pp. 4 - 14 (2020)
Mechanisms for active regulation of biomolecular condensates. Trends in Cell Biology 16.
Journal Article
47 (17), pp. 8961 - 8974 (2019)
Reconstructing complex lineage trees from scRNA-seq data using MERLoT. Nucleic Acids Research 17.
Journal Article
35 (18), pp. 3517 - 3519 (2019)
PROSSTT: Probabilistic simulation of single-cell RNA-seq data for complex differentiation processes. Bioinformatics 18.
Journal Article
20 (1), 473 (2019)
HH-suite3 for fast remote homology detection and deep protein annotation. BMC Bioinformatics 19.
Journal Article
35 (16), pp. 2856 - 2858 (2019)
MMseqs2 desktop and local web server app for fast, interactive sequence searches. Bioinformatics 20.
Journal Article
10 (1), 2909 (2019)
Lysine/RNA-interactions drive and regulate biomolecular condensation. Nature Communications