Publications of V. Subramaniam

Cherny, D. I.; Hoyer, W.; Subramaniam, V.; Jovin, T. M.: Double-stranded DNA stimulates the fibrillation of α-synuclein in vitro and is associated with the mature fibrils: An electron microscopy study. Journal of Molecular Biology 344, doi:10.1016/j.jmb.2004.09.096, pp. 929 - 938 (2004)

Hoyer, W.; Cherny, D. I.; Subramaniam, V.; Jovin, T. M.: Impact of the acidic C-terminal region comprising amino acids 109-140 on α-synuclein aggregation in vitro. Biochemistry 43 (51), doi:10.1021/bi048453u, pp. 16233 - 16242 (2004)

Masarik, M.; Stobiecka, A.; Kizek, R.; Jelen, F.; Pechan, Z.; Hoyer, W.; Jovin, T. M.; Subramaniam, V.; Palecek, E.: Sensitive electrochemical detection of native and aggregated α-synuclein protein involved in Parkinson's Disease. Electroanalysis 16 (13-14), doi:10.1002/elan.200403009, pp. 1172 - 1181 (2004)

Hoyer, W.; Cherny, D. I.; Subramaniam, V.; Jovin, T. M.: Rapid self-assembly of α-synuclein observed by in situ atomic force microscopy. Journal of Molecular Biology 340 (1), pp. 127 - 139 (2004)

Fernandez, C. O.; Hoyer, W.; Zweckstetter, M.; Jares-Erijman, E. A.; Subramaniam, V.; Griesinger, C.; Jovin, T. M.: NMR of α-synuclein-polyamine complexes elucidates the mechanism and kinetics of induced aggregation. EMBO Journal 23, doi:10.1038/sj.emboj.7600211, pp. 2039 - 2046 (2004)

Antony, T.; Hoyer, W.; Cherny, D. I.; Heim, G.; Jovin, T. M.; Subramaniam, V.: Cellular polyamines promote the aggregation of α-synuclein. Journal of Biological Chemistry 278 (5), pp. 3235 - 3240 (2003)

Rodriguez-Caso, C.; Rodriguez-Agudo, D.; Moya-Garcia, A. A.; Fajardo, I.; Medina, M. A.; Subramaniam, V.; Sanchez-Jimenez, F.: Local changes in the catalytic site of mammalian histidine decarboxylase can affect its global conformation and stability. European Journal of Biochemistry 270, pp. 4376 - 4387 (2003)

Habuchi, S.; Cotlet, M.; Hofkens, J.; Dirix, G.; Michiels, J.; Vanderleyden, J.; Subramaniam, V.; De Schryver, F. C.: Resonance energy transfer in a calcium concentration-dependent cameleon protein. Biophysical Journal 83 (6), pp. 3499 - 3506 (2002)

Kruglik, S. G.; Subramaniam, V.; Greve, J.; Otto, C.: Resonance CARS study of the structure of "green" and "red" chromophores within the red fluorescent protein DsRed. Journal of the American Chemical Society 124 (37), pp. 10992 - 10993 (2002)

Hoyer, W.; Antony, T.; Cherny, D. I.; Heim, G.; Jovin, T. M.; Subramaniam, V.: Dependence of α-synuclein aggregate morphology on solution conditions. Journal of Molecular Biology 322 (2), pp. 383 - 393 (2002)

Clayton, A. H. A.; Hanley, Q. S.; Arndt-Jovin, D. J.; Subramaniam, V.; Jovin, T. M.: Dynamic fluorescence anisotropy imaging microscopy in the frequency domain (rFLIM). Biophysical Journal 83 (3), pp. 1631 - 1649 (2002)

Blum, C.; Subramaniam, V.; Schleifenbaum, F.; Stracke, F.; Angres, B.; Terskikh, A.; Meixner, A. J.: Single molecule fluorescence spectroscopy of mutants of the Discosoma red fluorescent protein DsRed. Chemical Physics Letters 362 (5-6), pp. 355 - 361 (2002)

Sacchetti, A.; Subramaniam, V.; Jovin, T. M.; Alberti, S.: Oligomerization of DsRed is required for the generation of a functional red fluorescent chromophore. FEBS Letters 525 (1-3), pp. 13 - 19 (2002)

Antony, T.; Subramaniam, V.: A molecular beacon strategy for real-time monitoring of triplex DNA formation kinetics. Antisense & Nucleic Acid Drug Development 12 (3), pp. 145 - 154 (2002)

Pavlov, N. A.; Cherny, D. I.; Heim, G.; Jovin, T. M.; Subramaniam, V.: Amyloid fibrils from the mammalian protein prothymosin α. FEBS Letters 517 (1-3), pp. 37 - 40 (2002)

Fasshauer, D.; Antonin, W.; Subramaniam, V.; Jahn, R.: SNARE assembly and disassembly exhibit a pronounced hysteresis. Nature Structural Biology 9 (2), pp. 144 - 151 (2002)

Pavlov, N. A.; Cherny, D. I.; Nazimov, I. V.; Slesarev, A. I.; Subramaniam, V.: Identification, cloning and characterization of a new DNA- binding protein from the hyperthermophilic methanogen Methanopyrus kandleri. Nucleic Acids Research 30 (3), pp. 685 - 694 (2002)

Antony, T.; Subramaniam, V.: Comparison of nucleic acid hybridization using molecular beacons or FRET-oligos: Sequence length and salt effects. Biophysical Journal (Annual Meeting Abstracts 2002) 82 (1), p. 429a - 429a (2002)

Creemers, T. M. H.; Lock, A. J.; Subramaniam, V.; Jovin, T. M.; Voelker, S.: Red-shifted mutants of green fluorescent protein: reversible photoconversions studied by hole-burning and high-resolution spectroscopy. Chemical Physics 275 (1-3 Sp. Iss. SI), pp. 109 - 121 (2002)

Garcia-Parajo, M. F.; Koopman, M.; van Dijk, E. M. H. P.; Subramaniam, V.; van Hulst, N. F.: Single molecule studies of the red autofluorescent protein DsRed. Biophysical Journal (Annual Meeting Abstracts) 82 (1), p. 48a - 48a (2002)