Publications

Journal Article (42)

1.
Journal Article
Palikyras, S.; Sofiadis, K.; Stavropoulou, A.; Danieli-Mackay, A.; Varamogianni-Mamatsi, V.; Hörl, D.; Nasiscionyte, S.; Zhu, Y.; Papadionysiou, I.; Papadakis, A. et al.; Josipovic, N.; Zirkel, A.; O'Connell, A.; Loughran, G.; Keane, J.; Michel, A.; Wagner, W.; Beyer, A.; Harz, H.; Leonhardt, H.; Lukinavičius, G.; Nikolaou, C.; Papantonis, A.: Rapid and synchronous chemical induction of replicative-like senescence via a small molecule inhibitor. Aging Cell, e14083 (2024)
2.
Journal Article
DʼEste, E.; Lukinavičius, G.; Lincoln, R.; Opazo, F.; Fornasiero, E.F.: Advancing cell biology with nanoscale fluorescence imaging: essential practical considerations. Trends in Cell Biology (2024)
3.
Journal Article
Breindl, M.; Spitzer, D.; Gerasimaitė, R.; Kairys, V.; Schubert, T.; Henfling, R.; Schwartz, U.; Lukinavičius, G.; Manelytė, L.: Biochemical and cellular insights into the Baz2B protein, a non-catalytic subunit of the chromatin remodeling complex. Nucleic Acids Research, gkad1096 (2023)
4.
Journal Article
Orsi, G. A.; Tortora, M. M. C.; Horard, B.; Baas, D.; Kleman, J.-P.; Bucevičius, J.; Lukinavičius, G.; Jost, D.; Loppin, B.: Biophysical ordering transitions underlie genome 3D re-organization during cricket spermiogenesis. Nature Communications 14, 4187 (2023)
5.
Journal Article
Pradhan, S.; Apaydin, S.; Bucevičius, J.; Gerasimaitė, R.; Kostiuk, G.; Lukinavičius, G.: Sequence-specific DNA labelling for fluorescence microscopy. Biosensors and Bioelectronics 230, 115256 (2023)
6.
Journal Article
Bucevičius, J.; Gerasimaitė, R.; Kiszka, K. A.; Pradhan, S.; Kostiuk, G.; Koenen, T.; Lukinavičius, G.: A general highly efficient synthesis of biocompatible rhodamine dyes and probes for live-cell multicolor nanoscopy. Nature Communications 14 (1), 1306 (2023)
7.
Journal Article
Gerasimaite, R.; Bucevicius, J.; Kiszka, K.; Schnorrenberg, S.; Kostiuk, G.; Koenen, T.; Lukinavičius, G.: Blinking fluorescent probes for tubulin nanoscopy in living and fixed cells. ACS Chemical Biology 16 (11), pp. 2130 - 2136 (2021)
8.
Journal Article
Lohner, P.; Zmyslia, M.; Thurn, J.; Pape, J. K.; Gerasimaite, R.; Keller-Findeisen, J.; Groeer, S.; Deuringer, B.; Süss, R.; Walther, A. et al.; Hell, S. W.; Lukinavičius, G.; Hugel, T.; Jessen-Trefzer, C.: Inside a shell – organometallic catalysis inside encapsulin nanoreactors. Angewandte Chemie International Edition 133 (44), pp. 24028 - 24034 (2021)
9.
Journal Article
Schmitz-Elbers, M.; Lukinavicius, G.; Smit, T. H.: Live fluorescence imaging of F-actin organization in chick whole embryo cultures using SiR-actin. Cells 10, 1578 (2021)
10.
Journal Article
Cavazza, T.; Takeda, Y.; Politi, A. Z.; Aushev, M.; Aldag, P.; Baker, C.; Choudhary, M.; Bucevičius, J.; Lukinavičius, G.; Elder, K. et al.; Blayney, M.; Lucas-Hahn, A.; Niemann, H.; Herbert, M.; Schuh, M.: Parental genome unification is highly error-prone in mammalian embryos. Cell 184 (11), pp. 2860 - 2877.e22 (2021)
11.
Journal Article
Quentin, C.; Gerasimaite, R.; Freidzon, A.; Atabekyan, L. S.; Lukinavičius, G.; Belov, V. N.; Mitronova, G.: Direct visualization of amlodipine intervention into living cells by means of fluorescence microscopy. Molecules 26 (10), 2997 (2021)
12.
Journal Article
Bucevicius, J.; Gilat, T.; Lukinavicius, G.: Far-red switching DNA probes for live cell nanoscopy. Chemical Communications 56 (94), pp. 14797 - 14800 (2020)
13.
Journal Article
Bucevicius, J.; Kostiuk, G.; Gerasimaite, R.; Gilat, T.; Lukinavicius, G.: Enhancing the biocompatibility of rhodamine fluorescent probes by a neighbouring group effect. Chemical Science 11 (28), pp. 7313 - 7323 (2020)
14.
Journal Article
Gerasimaite, R.; Seikowski, J.; Schimpfhauser, J.; Kostiuk, G.; Gilat, T.; D'Este, E.; Schnorrenberg, S.; Lukinavicius, G.: Efflux pump insensitive rhodamine–jasplakinolide conjugates for G- and F-actin imaging in living cells. Organic Biomolecular Chemistry 18 (15), pp. 2929 - 2937 (2020)
15.
Journal Article
Kostiuk, G.; Bucevicius, J.; Gerasimaite, R.; Lukinavicius, G.: Application of STED imaging for chromatin studies. Journal of Physics D 52 (50), 504003 (2019)
16.
Journal Article
Bucevicius, J.; Keller-Findeisen, J.; Gilat, T.; Hell, S. W.; Lukinavicius, G.: Rhodamine-Hoechst positional isomers for highly efficient staining of heterochromatin. Chemical Science 10 (7), pp. 1962 - 1970 (2019)
17.
Journal Article
Butkevich, A.; Bossi, M. L.; Lukinavicius, G.; Hell, S. W.: Triarylmethane fluorophores resistant to oxidative photobluing. Journal of the American Chemical Society 141 (2), pp. 981 - 989 (2019)
18.
Journal Article
Bucevicius, J.; Lukinavicius, G.; Gerasimaite, R.: The use of Hoechst dyes for DNA staining and beyond. Chemosensors 6 (2), 18 (2018)
19.
Journal Article
Lukinavicius, G.; Mitronova, G.; Schnorrenberg, S.; Butkevich, A.; Barthel, H.; Belov, V. N.; Hell, S. W.: Fluorescent dyes and probes for super-resolution microscopy of microtubules and tracheoles in living cells and tissues. Chemical Science 9 (13), pp. 3324 - 3334 (2018)
20.
Journal Article
Mitronova, G.; Lukinavicius, G.; Butkevich, A.; Kohl, T.; Belov, V. N.; Lehnart, S. E.; Hell, S. W.: High-affinity functional fluorescent ligands for human β-adrenoceptors. Scientific Reports 7, 12319 (2017)
21.
Journal Article
Butkevich, A.; Lukinavicius, G.; D'Este, E.; Hell, S. W.: Cell-permeant large stokes shift dyes for transfection-free multicolor nanoscopy. Journal of the American Chemical Society 139 (36), pp. 12378 - 12381 (2017)
22.
Journal Article
Lukinavicius, G.; Reymond, L.; Umezawa, K.; Sallin, O.; D'Este, E.; Göttfert, F.; Ta, H.; Hell, S. W.; Urano, Y.; Johnsson, K.: Fluorogenic probes for multicolor imaging in living cells. Journal of the American Chemical Society 138 (30), pp. 9365 - 9368 (2016)
23.
Journal Article
Lukinavicius, G.; Blaukopf, C.; Pershagen, E.; Schena, A.; Reymond, L.; Derivery, E.; Gonzalez-Gaitan, M.; D'Este, E.; Hell, S. W.; Gerlich, D. W. et al.; Johnsson, K.: SiR–Hoechst is a far-red DNA stain for live-cell nanoscopy. Nature Communications 6, 8497 (2015)
24.
Journal Article
Lukinavicius, G.; Johnsson, K.: Fluorescence microscopy: Strategic blinking. Nature Chemistry 6 (8), pp. 663 - 664 (2014)
25.
Journal Article
Lukinavicius, G.; Reymond, L.; D'Este, E.; Masharina, A.; Göttfert, F.; Ta, H.; Guether, A.; Fournier, M.; Rizzo, S.; Waldmann, H. et al.; Blaukopf, C.; Sommer, C.; Gerlich, D. W.; Arndt, H. D.; Hell, S. W.; Johnsson, K.: Fluorogenic probes for live-cell imaging of the cytoskeleton. Nature Methods 11 (7), pp. 731 - 733 (2014)
26.
Journal Article
Carlini, L.; Benke, A.; Reymond, L.; Lukinavicius, G.; Manley, S.: Reduced dyes enhance single-molecule localization density for live superresolution imaging. ChemPhysChem 15 (4), pp. 750 - 755 (2014)
27.
Journal Article
Schoonderwoert, V.; Dijkstra, R.; Lukinavicius, G.; Kobler, O.: Huygens STED deconvolution increases signal-to-noise and image resolution towards 22 nm. Microscopy Today 21 (6), pp. 38 - 44 (2013)
28.
Journal Article
Lukinavicius, G.; Lavogina, D.; Gönczy, P.; Johnsson, K.: Commercial Cdk1 antibodies recognize the centrosomal protein Cep152. BioTechniques 55 (3), pp. 111 - 114 (2013)
29.
Journal Article
Lukinavicius, G.; Lavogina, D.; Orpinell, M.; Umezawa, K.; Reymond, L.; Garin, N.; Gönczy, P.; Johnsson, K.: Selective chemical crosslinking reveals a Cep57-Cep63-Cep152 centrosomal complex. Current Biology 23 (4), pp. 265 - 270 (2013)
30.
Journal Article
Lukinavicius, G.; Umezawa, K.; Olivier, N.; Honigmann, A.; Yang, G.; Plass, T.; Müller, V.; Reymond, L.; Correa Jr., I. R.; Luo, Z. G. et al.; Schultz, C.; Lemke, E. A.; Heppenstall, P.; Eggeling, C.; Manley, S.; Johnsson, K.: A near-infrared fluorophore for live-cell super-resolution microscopy of cellular proteins. Nature Chemistry 5 (2), pp. 132 - 139 (2013)
31.
Journal Article
Correa, I. R.; Baker, B.; Zhang, A.; Sun, L.; Provost, C. R.; Lukinavicius, G.; Reymond, L.; Johnsson, K.; Xu, M. Q.: Substrates for improved live-cell fluorescence labeling of SNAP-tag. Current Pharmaceutical Design 19 (30), pp. 5414 - 5420 (2013)
32.
Journal Article
Lukinavicius, G.; Tomkuvienė, M.; Masevičius, V.; Klimašauskas, S.: Enhanced chemical stability of adomet analogues for improved methyltransferase-directed labeling of DNA. ACS Chemical Biology 8 (6), pp. 1134 - 1139 (2013)
33.
Journal Article
Lukinavicius, G.; Lapinaitė, A.; Urbanavičiūtė, G.; Gerasimaitė, R.; Klimašauskas, S.: Engineering the DNA cytosine-5 methyltransferase reaction for sequence-specific labeling of DNA. Nucleic Acids Research 40 (22), pp. 11594 - 11602 (2012)
34.
Journal Article
Lukinavicius, G.; Johnsson, K.: Switchable fluorophores for protein labeling in living cells. Current Opinion in Chemical Biology 15 (6), pp. 768 - 774 (2011)
35.
Journal Article
Reymond, L.; Lukinavicius, G.; Umezawa, K.; Maurel, D.; Brun, M. A.; Masharina, A.; Bojkowska, K.; Mollwitz, B.; Schena, A.; Griss, R. et al.; Johnsson, K.: Visualizing biochemical activities in living cells through chemistry. Chimia 65 (11), pp. 868 - 871 (2011)
36.
Journal Article
Dellagiacoma , C.; Lukinavicius, G.; Boccio, N.; Banala, S.; Geissbühler, S.; Märki, I.; Johnsson, K.; Lasser, T.: Targeted photoswitchable probe for nanoscopy of biological structures. ChemBioChem 11 (10), pp. 1361 - 1363 (2010)
37.
Journal Article
Liutkevičiūtė, Z.; Lukinavicius, G.; Masevičius, V.; Daujotytė, D.; Klimašauskas, S.: Cytosine-5-methyltransferases add aldehydes to DNA. Nature Chemical Biology 5 (6), pp. 400 - 402 (2009)
38.
Journal Article
Gautier, A.; Nakata, E.; Lukinavicius, G.; Tan, K. T.; Johnsson, K.: Selective cross-linking of interacting proteins using self-labeling tags. Journal of the American Chemical Society 131 (49), pp. 17954 - 17962 (2009)
39.
Journal Article
Klimasauskas, S.; Lukinavicius, G.: Chemistry of AdoMet‐dependent methyltransferases. Wiley Encyclopedia of Chemical Biology (2008)
40.
Journal Article
Lukinavicius, G.; Lapienė, V.; Staševskij, Z.; Dalhoff, C.; Weinhold, E.; Klimašauskas, S.: Targeted labeling of DNA by methyltransferase-directed transfer of activated groups (mTAG). Journal of the American Chemical Society 129 (10), pp. 2758 - 2759 (2007)
41.
Journal Article
Dalhoff, C.; Lukinavicius, G.; Klimas̆auskas , S.; Weinhold, E.: Direct transfer of extended groups from synthetic cofactors by DNA methyltransferases. Nature Chemical Biology 2, pp. 31 - 32 (2006)
42.
Journal Article
Dalhoff, C.; Lukinavicius, G.; Klimašauskas, S.; Weinhold, E.: Synthesis of S-adenosyl-L-methionine analogs and their use for sequence-specific transalkylation of DNA by methyltransferases. Nature Protocols 1, pp. 1879 - 1886 (2006)

Book Chapter (1)

43.
Book Chapter
Lukinavicius, G.; Reymond, L.; Johnsson, K.: Fluorescent labeling of SNAP-tagged proteins in cells. In: Site-Specific Protein Labeling, pp. 107 - 118 (Eds. Gautier, A.; Hinner, M. J.). Springer Nature, New York, N.Y. (2015)

Editorial (1)

44.
Editorial
Chen, Z.; Lukinavicius, G.: Fluorescent probes for live cell imaging. Chemosensors 6 (3), p. 41 - 41 (2018)

Patent (2)

45.
Patent
Umezawa, K.; Lukinavicius, G.; Johnsson, K.: Cell permeable fluorescent dye. WO 2013/029650 A1 (2013)
46.
Patent
Weinhold, E.; Dalhoff, S.; Klimasauskas, S.; Lukinavicius, G.: New S-adenosyl-L-methionine analogs with extended activated groups for transfer by methyltransferases. WO002006108678A2 (2006)
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