Publications of J. Söding
All genres
Journal Article (115)
81.
Journal Article
37 (Suppl. 2), pp. W446 - W451 (2009)
HHomp-prediction and classification of outer membrane proteins. Nucleic Acids Research 82.
Journal Article
8, 51 (2008)
PDBalert: Automatic, recurrent remote homology tracking and protein structure prediction. BMC Structural Biology 83.
Journal Article
283, pp. 26423 - 26427 (2008)
Genome-associated RNA polymerase II includes the dissociable Rpb4/7 subcomplex. The Journal of Biological Chemistry 84.
Journal Article
71 (2), pp. 795 - 803 (2008)
Evolution of the beta-propeller fold. Proteins: Structure, Function, and Bioinformatics 85.
Journal Article
24 (6), pp. 807 - 814 (2008)
De novo identification of highly diverged protein repeats by probabilistic consistency. Bioinformatics 86.
Journal Article
24 (5), pp. 613 - 620 (2008)
Prediction of protein functional residues from sequence by probability density estimation. Bioinformatics 87.
Journal Article
153 (5), pp. 1394 - 1404 (2007)
ScbA from Streptomyces coelicolor A3(2) has homology to fatty acid synthases and is able to synthesize-butyrolactones. Microbiology/SGM 88.
Journal Article
7, 17 (2007)
On the origin of the histone fold. BMC Structural Biology 89.
Journal Article
8, 2 (2007)
TPRpred: A tool for prediction of TPR-, PPR- and SELI-like repeats from protein sequences. BMC Bioinformatics 90.
Journal Article
155 (2), pp. 140 - 145 (2006)
Comparative analysis of coiled-coil prediction methods. Journal of Structural Biology 91.
Journal Article
34, pp. W335 - W339 (2006)
The MPI Bioinformatics toolkit for protein sequence analysis. Nucleic Acids Research (London) 92.
Journal Article
34, pp. W137 - W142 (2006)
HHrep: de novo protein repeat detection and the origin of TIM barrels. Nucleic Acids Research (London) 93.
Journal Article
34, pp. W374 - W378 (2006)
HHsenser: Exhaustive transitive profile search using HMM-HMM comparison. Nucleic Acids Research (London) 94.
Journal Article
62 (4), pp. 415 - 418 (2006)
Expression, crystallization and preliminary X-ray crystallographic studies of the outer membrane protein OmpW from Escherichia coli. Acta Crystallographica Section F: Structural Biology and Crystallization Communications 95.
Journal Article
13 (6), pp. 919 - 928 (2005)
AbrB-like transcription factors assume a swapped hairpin fold that is evolutionarily related to double-psi beta barrels. Structure 96.
Journal Article
33, pp. W239 - W243 (2005)
REPPER-repeats and their periodicities in fibrous proteins. Nucleic Acids Research (London) 97.
Journal Article
233 (3), pp. 1056 - 1063 (2005)
Retroactive, a membrane-anchored extracellular protein related to vertebrate snake neurotoxin-like proteins, is required for cuticle organization in the larva of Drosophila melanogaster. Developmental Dynamics 98.
Journal Article
21 (7), pp. 951 - 960 (2005)
Protein homology detection by HMM-HMM comparison. Bioinformatics 99.
Journal Article
33, pp. W244 - W248 (2005)
The HHpred interactive server for protein homology detection and structure prediction. Nucleic Acids Research (London) 100.
Journal Article
25 (9), pp. 837 - 846 (2003)
More than the sum of their parts: on the evolution of proteins from peptides. Bioessays