Publications
Journal Article (241)
1.
Journal Article
Gut colonization by Bacteroides requires translation by an EF-G paralog lacking GTPase activity. EMBO Journal 42 (2), e112372 (2023)
2.
Journal Article
Translation factor accelerating peptide bond formation on the ribosome: EF-P and eIF5A as entropic catalysts and a potential drug targets. BBA Advances 3, 100074 (2023)
3.
Journal Article
Ribosome selectivity and nascent chain context in modulating the incorporation of fluorescent non-canonical amino acid into proteins. Scientific Reports 12, 12848 (2022)
4.
Journal Article
Altered tRNA dynamics during translocation on slippery mRNA as determinant of spontaneous ribosome frameshifting. Nature Communications 13, 4231 (2022)
5.
Journal Article
Mutagenic analysis of the HIV restriction factor shiftless. Viruses 14 (7), 1454 (2022)
6.
Journal Article
Conformational rearrangements upon start codon recognition in human 48S translation initiation complex. Nucleic Acids Research 50 (9), pp. 5282 - 5298 (2022)
7.
Journal Article
Cotranslational biogenesis of membrane proteins in bacteria. Frontiers in Molecular Biosciences 9, 871121 (2022)
8.
Journal Article
A switch from α‐helical to β‐strand conformation during co‐translational protein folding. The EMBO Journal 41 (4), e109175 (2022)
9.
Journal Article
Tissue-specific regulation of translational readthrough tunes functions of the traffic jam transcription factor. Nucleic Acids Research 50 (11), pp. 6001 - 6019 (2022)
10.
Journal Article
Kinetic control of nascent protein biogenesis by peptide deformylase. Scientific Reports 11, 24457 (2021)
11.
Journal Article
Structural mechanism of GTPase-powered ribosome-tRNA movement. Nature Communications 12 (1), 5933 (2021)
12.
Journal Article
Perturbation of ribosomal subunit dynamics by inhibitors of tRNA translocation. RNA 27 (9), pp. 981 - 990 (2021)
13.
Journal Article
Long-range allostery mediates cooperative adenine nucleotide binding by the Ski2-like RNA helicase Brr2. Journal of Biological Chemistry 297 (1), 100829 (2021)
14.
Journal Article
Lateral gate dynamics of the bacterial translocon during cotranslational membrane protein insertion. Proceedings of the National Academy of Sciences of the USA 118 (26), e2100474118 (2021)
15.
Journal Article
Translation error clusters induced by aminoglycoside antibiotics. Nature Communications 12, 1830 (2021)
16.
Journal Article
Yeast translation elongation factor eEF3 promotes late stages of tRNA translocation. EMBO Journal 40 (6), e106449 (2021)
17.
Journal Article
Ribosome-bound Get4/5 facilitates the capture of tail-anchored proteins by Sgt2 in yeast. Nature Communications 12, 782 (2021)
18.
Journal Article
Translational control by ribosome pausing in bacteria: How a non-uniform pace of translation affects protein production and folding. Frontiers in Microbiology 11, 619430 (2021)
19.
Journal Article
Dual function of GTPBP6 in biogenesis and recycling of human mitochondrial ribosomes. Nucleic Acids Research 48 (22), pp. 12929 - 12942 (2020)
20.
Journal Article
Gradual compaction of nascent peptide during cotranslational folding on the ribosome. eLife 9, e60895 (2020)
21.
Journal Article
Mechanism of ribosome rescue by alternative ribosome-rescue factor B. Nature Communications 11, 4106 (2020)
22.
Journal Article
Co‐translational insertion and topogenesis of bacterial membrane proteins monitored in real time. EMBO Journal 39 (15), e104054 (2020)
23.
Journal Article
Polysomes bypass a 50-nucleotide coding gap less efficiently than monosomes due to attenuation of a 5′ mRNA stem–loop and enhanced drop-off. Journal of Molecular Biology 432 (16), pp. 4369 - 4387 (2020)
24.
Journal Article
Translational recoding: Canonical translation mechanisms reinterpreted. Nucleic Acids Research 48 (3), pp. 1056 - 1067 (2020)
25.
Journal Article
Cotranslational folding of proteins on the ribosome. Biomolecules 10 (1), 97 (2020)
26.
Journal Article
Active role of elongation factor G in maintaining the mRNA reading frame during translation. Science Advances 5 (12), eaax8030 (2019)
27.
Journal Article
Converting GTP hydrolysis into motion: Versatile translational elongation factor G. Biological Chemistry 401 (1), pp. 131 - 142 (2019)
28.
Journal Article
Thermodynamic control of −1 programmed ribosomal frameshifting. Nature Communications 10, 4598 (2019)
29.
Journal Article
Mechanisms and biomedical implications of –1 programmed ribosome frameshifting on viral and bacterial mRNAs. FEBS Letters 593 (13), pp. 1468 - 1482 (2019)
30.
Journal Article
The epitranscriptome in translation regulation: mRNA and tRNA modifications as the two sides of the same coin? FEBS Letters 593 (13), pp. 1483 - 1493 (2019)
31.
Journal Article
EF-G-induced ribosome sliding along the noncoding mRNA. Science Advances 5 (6), eaaw9049 (2019)
32.
Journal Article
Modulation of HIV-1 Gag/Gag-Pol frameshifting by tRNA abundance. Nucleic Acids Research 47 (10), pp. 5210 - 5222 (2019)
33.
Journal Article
Translation termination depends on the sequential ribosomal entry of eRF1 and eRF3. Nucleic Acids Research 47 (9), pp. 4798 - 4813 (2019)
34.
Journal Article
Broad range of missense error frequencies in cellular proteins. Nucleic Acids Research 47 (6), pp. 2932 - 2945 (2019)
35.
Journal Article
Elongation factor Tu's nucleotide binding is governed by a thermodynamic landscape unique among bacterial translation factors. Journal of the American Chemical Society 141 (26), pp. 10236 - 10246 (2019)
36.
Journal Article
Decomposition of time-dependent fluorescence signals reveals codon-specific kinetics of protein synthesis. Nucleic Acids Research 46 (22), e130 (2018)
37.
Journal Article
Small synthetic molecule-stabilized RNA pseudoknot as an activator for -1 ribosomal frameshifting. Nucleic Acids Research 46 (16), pp. 8079 - 8089 (2018)
38.
Journal Article
Functions of unconventional mammalian translational GTPases GTPBP1 and GTPBP2. Genes and Development 32 (17-18), pp. 1226 - 1241 (2018)
39.
Journal Article
Visualization of translation termination intermediates trapped by the Apidaecin 137 peptide during RF3-mediated recycling of RF1. Nature Communications 9, 3053 (2018)
40.
Journal Article
Cotranslational protein targeting to the membrane: Nascent-chain transfer in a quaternary complex formed at the translocon. Scientific Reports 8 (1), 9922 (2018)
41.
Journal Article
Co-translational folding trajectory of the HemK helical domain. Biochemistry 57 (25), pp. 3460 - 3464 (2018)
42.
Journal Article
Dynamics of ribosomes and release factors during translation termination in E-coli. eLife 7, e34252 (2018)
43.
Journal Article
Translation initiation in bacterial polysomes through ribosome loading on a standby site on a highly translated mRNA. Proceedings of the National Academy of Sciences of the United States of America 115 (17), pp. 4411 - 4416 (2018)
44.
Journal Article
Translation in prokaryotes. Cold Spring Harbor Perspectives in Biology 10 (9), a032664 (2018)
45.
Journal Article
Deciphering the reading of the genetic code by near-cognate tRNA. Proceedings of the National Academy of Sciences of the United States of America 115 (12), pp. 3018 - 3023 (2018)
46.
Journal Article
Signal recognition particle binds to translating ribosomes before emergence of a signal anchor sequence. Nucleic Acids Research 45 (20), pp. 11858 - 11866 (2017)
47.
Journal Article
Structural basis for polyproline-mediated ribosome stalling and rescue by the translation elongation factor EF-P. Molecular Cell 68 (3), pp. 515 - 527 (2017)
48.
Journal Article
Non-canonical binding site for bacterial initiation factor 3 on the large ribosomal subunit. Cell Reports 20 (13), pp. 3113 - 3122 (2017)
49.
Journal Article
Effect of fusidic acid on the kinetics of molecular motions during EF-G-induced translocation on the ribosome. Scientific Reports 7, 10536 (2017)
50.
Journal Article
An antimicrobial peptide that inhibits translation by trapping release factor trap. Nature Structural and Molecular Biology 24 (9), pp. 752 - 757 (2017)
51.
Journal Article
Ribosome rearrangements at the onset of translational bypassing. Science Advances 3 (6), e1700147 (2017)
52.
Journal Article
Conditional switch between frameshifting regimes upon translation of dnaX mRNA. Molecular Cell 66 (4), pp. 558 - 567 (2017)
53.
Journal Article
Signal recognition particle prevents N-terminal processing of bacterial membrane proteins. Nature Communications 8, 15562 (2017)
54.
Journal Article
Thio-modification of tRNA at the wobble position as regulator of the kinetics of decoding and translocation on the ribosome. Journal of the American Chemical Society 139 (16), pp. 5857 - 5864 (2017)
55.
Journal Article
Ribosome dynamics during decoding. Philosophical Transactions of the Royal Society B 372 (1716), 20160182 (2017)
56.
Journal Article
Co-translational protein folding: Progress and methods. Current Opinion in Structural Biology 42, pp. 83 - 89 (2017)
57.
Journal Article
The pathway to GTPase activation of elongation factor SelB on the ribosome. Nature 540 (7631), pp. 80 - 85 (2016)
58.
Journal Article
NSUN3 and ABH1 modify the wobble position of mt-tRNAMet to expand codon recognition in mitochondrial translation. The EMBO Journal 35 (19), pp. 2104 - 2119 (2016)
59.
Journal Article
The bacterial SRP receptor, FtsY, is activated on binding to the translocon. Molecular Microbiology 102 (1), pp. 152 - 167 (2016)
60.
Journal Article
Kinetics of spontaneous and EF-G-accelerated rotation of ribosomal subunits. Cell Reports 16 (8), pp. 2187 - 2196 (2016)
61.
Journal Article
Electrostatics and intrinsic disorder drive translocon binding of the SRP receptor FtsY. Angewandte Chemie International Edition 55 (33), pp. 9544 - 9547 (2016)
62.
Journal Article
Translational GTPases. Biopolymers 105 (8), pp. 463 - 475 (2016)
63.
Journal Article
The ribosome in action: Tuning of translational efficiency and protein folding. Protein Science 25 (8), pp. 1390 - 1406 (2016)
64.
Journal Article
Essential structural elements in tRNAPro for EF-P-mediated alleviation of translation stalling. Nature Communications 7, 11657 (2016)
65.
Journal Article
Protein elongation, co-translational folding and targeting. Journal of Molecular Biology 428 (10, P. B), pp. 2165 - 2185 (2016)
66.
Journal Article
Inhibition of translation initiation complex formation by GE81112 unravels a 16S rRNA structural switch involved in P-site decoding. Proceedings of the National Academy of Sciences of the United States of America 113 (16), pp. E2286 - E2295 (2016)
67.
Journal Article
Choreography of molecular movements during ribosome progression along mRNA. Nature Structural and Molecular Biology 23 (4), pp. 342 - 348 (2016)
68.
Journal Article
Synonymous codons direct cotranslational folding toward different protein conformations. Molecular Cell 61 (3), pp. 341 - 351 (2016)
69.
Journal Article
tRNA wobble modifications and protein homeostasis. Translation 4 (1), e1143076 (2016)
70.
Journal Article
Translocation as continuous movement through the ribosome. RNA Biology 13 (12), pp. 1197 - 1203 (2016)
71.
Journal Article
Directional transition from initiation to elongation in bacterial translation. Nucleic Acids Research 43 (22), pp. 10700 - 10712 (2015)
72.
Journal Article
Two-state intramolecular charge transfer (ICT) with 3,5-dimethyl-4(dimethylamino)benzonitrile (MMD) and its meta-isomer mMMD. Ground state amino twist not essential for ICT. Journal of Physical Chemistry A 119 (49), pp. 11820 - 11836 (2015)
73.
Journal Article
Activities of the peptidyl transferase center of ribosomes lacking protein L27. RNA 21 (12), pp. 2047 - 2052 (2015)
74.
Journal Article
Cotranslational protein folding on the ribosome monitored in real time. Science 250 (6264), pp. 1104 - 1107 (2015)
75.
Journal Article
Entropic contribution of elongation factor P to proline positioning at the catalytic center of the ribosome. Journal of the American Chemical Society 137 (40), pp. 12997 - 13006 (2015)
76.
Journal Article
Ribosome binding induces repositioning of the signal recognition particle receptor on the translocon. Journal of Cell Biology 211 (1), pp. 91 - 104 (2015)
77.
Journal Article
Partitioning between recoding and termination at a stop codon-selenocysteine insertion sequence. Nucleic Acids Research 43 (13), pp. 6426 - 6438 (2015)
78.
Journal Article
Fluctuations between multiple EF-G-induced chimeric tRNA states during translocation on the ribosome. Nature Communications 6, 7442 (2015)
79.
Journal Article
Major reorientation of tRNA substrates defines specificity of dihydrouridine synthases. Proceedings of the National Academy of Sciences of the United States of America 112 (19), pp. 6033 - 6037 (2015)
80.
Journal Article
Changed in translation: mRNA recoding by −1 programmed ribosomal frameshifting. Trends in Biochemical Sciences 40 (5), pp. 265 - 274 (2015)
81.
Journal Article
Structure of the E. coli ribosome–EF-Tu complex at <3 Å resolution by Cs-corrected cryo-EM. Nature 520 (7548), pp. 567 - 570 (2015)
82.
Journal Article
Studying macromolecular complex stoichiometries by peptide-based mass spectrometry. Proteomics 15 (5-6), pp. 862 - 879 (2015)
83.
Journal Article
Amicoumacin a inhibits translation by stabilizing mRNA interaction with the ribosome. Molecular Cell 56 (4), pp. 531 - 540 (2014)
84.
Journal Article
Deducing the kinetics of protein synthesis in vivo from the transition rates measured in vitro. PLoS Computational Biology 10 (10), e1003909 (2014)
85.
Journal Article
Lateral opening of the bacterial translocon on ribosome binding and signal peptide insertion. Nature Communications 5, 5263 (2014)
86.
Journal Article
Ribosome-induced tuning of GTP hydrolysis by a translational GTPase. Proceedings of the National Academy of Sciences of the United States of America 111 (40), pp. 14418 - 14423 (2014)
87.
Journal Article
Synchronous tRNA movements during translocation on the ribosome are orchestrated by elongation factor G and GTP hydrolysis. BioEssays 36 (10), pp. 908 - 918 (2014)
88.
Journal Article
Structural basis for the inhibition of the eukaryotic ribosome. Nature 513 (7519), pp. 517 - 522 (2014)
89.
Journal Article
High-efficiency translational bypassing of non-coding nucleotides specified by mRNA structure and nascent peptide. Nature communications 5, 4459 (2014)
90.
Journal Article
Programmed –1 frameshifting by kinetic partitioning during impeded translocation. Cell 157 (7), pp. 1619 - 1631 (2014)
91.
Journal Article
Interplay between trigger factor and other protein biogenesis factors on the ribosome. Nature Communications 5, 4180 (2014)
92.
Journal Article
GTP hydrolysis by EF‐G synchronizes tRNA movement on small and large ribosomal subunits. EMBO Journal 33 (9), pp. 1073 - 1085 (2014)
93.
Journal Article
Timing of GTP binding and hydrolysis by translation termination factor RF3. Nucleic Acids Research 42 (3), pp. 1812 - 1820 (2014)
94.
Journal Article
Energy barriers and driving forces in tRNA translocation through the ribosome. Nature Structural and Molecular Biology 20 (12), pp. 1390 - 1396 (2013)
95.
Journal Article
Elongation factor P: Function and effects on bacterial fitness. Biopolymers 99 (11), pp. 837 - 845 (2013)
96.
Journal Article
A kinetic safety gate controlling the delivery of unnatural amino acids to the ribosome. Journal of the American Chemical Society 135 (45), pp. 17031 - 17038 (2013)
97.
Journal Article
The ribosome as a versatile catalyst: Reactions at the peptidyl transferase center. Current Opinion in Structural Biology 23 (4), pp. 595 - 602 (2013)
98.
Journal Article
tRNA tKUUU, tQUUG, and tEUUC wobble position modifications fine-tune protein translation by promoting ribosome A-site binding. Proceedings of the National Academy of Sciences of the United States of America 110 (30), pp. 12289 - 12294 (2013)
99.
Journal Article
Translocation in action. Science 340 (6140), pp. 1534 - 1535 (2013)