Publications

Journal Article (241)

1.
Journal Article
Han, W.; Peng, B.-Z.; Wang, C.; Townsend II, G. E.; Barry, N. A.; Peske, F.; Goodman, A. L.; Liu, J.; Rodnina, M. V.; Groisman, E. A.: Gut colonization by Bacteroides requires translation by an EF-G paralog lacking GTPase activity. EMBO Journal 42 (2), e112372 (2023)
2.
Journal Article
Mudryi, V.; Peske, F.; Rodnina, M. V.: Translation factor accelerating peptide bond formation on the ribosome: EF-P and eIF5A as entropic catalysts and a potential drug targets. BBA Advances 3, 100074 (2023)
3.
Journal Article
Thommen, M.; Draycheva, A.; Rodnina, M. V.: Ribosome selectivity and nascent chain context in modulating the incorporation of fluorescent non-canonical amino acid into proteins. Scientific Reports 12, 12848 (2022)
4.
Journal Article
Poulis, P.; Patel, A.; Rodnina, M. V.; Adio, S.: Altered tRNA dynamics during translocation on slippery mRNA as determinant of spontaneous ribosome frameshifting. Nature Communications 13, 4231 (2022)
5.
Journal Article
Jäger, N.; Ayyub, S. A.; Korniy, N.; Peske, F.; Hoffmann, M.; Rodnina, M. V.; Pöhlmann, S.: Mutagenic analysis of the HIV restriction factor shiftless. Viruses 14 (7), 1454 (2022)
6.
Journal Article
Yi, S.-H.; Petrychenko, V.; Schliep, J. E.; Goyal, A.; Linden, A.; Chari, A.; Urlaub, H.; Stark, H.; Rodnina, M. V.; Adio, S. et al.; Fischer, N.: Conformational rearrangements upon start codon recognition in human 48S translation initiation complex. Nucleic Acids Research 50 (9), pp. 5282 - 5298 (2022)
7.
Journal Article
Mercier, E.; Wang, X.; Bögeholz, L. A. K.; Wintermeyer, W.; Rodnina, M. V.: Cotranslational biogenesis of membrane proteins in bacteria. Frontiers in Molecular Biosciences 9, 871121 (2022)
8.
Journal Article
Agirrezabala, X.; Samatova, E.; Macher, M.; Liutkute, M.; Maiti, M.; Gil‐Carton, D.; Novacek, J.; Valle, M.; Rodnina, M. V.: A switch from α‐helical to β‐strand conformation during co‐translational protein folding. The EMBO Journal 41 (4), e109175 (2022)
9.
Journal Article
Karki, P.; Carney, T. D.; Maracci, C.; Yatsenko, A. S.; Shcherbata, H. R.; Rodnina, M. V.: Tissue-specific regulation of translational readthrough tunes functions of the traffic jam transcription factor. Nucleic Acids Research 50 (11), pp. 6001 - 6019 (2022)
10.
Journal Article
Bögeholz, L. A. K.; Mercier, E.; Wintermeyer, W.; Rodnina, M. V.: Kinetic control of nascent protein biogenesis by peptide deformylase. Scientific Reports 11, 24457 (2021)
11.
Journal Article
Petrychenko, V.; Peng, B. Z.; Schwarzer, A. C. d. A. P.; Peske, F.; Rodnina, M. V.; Fischer, N.: Structural mechanism of GTPase-powered ribosome-tRNA movement. Nature Communications 12 (1), 5933 (2021)
12.
Journal Article
Belardinelli, R.; Sharma, H.; Peske, F.; Rodnina, M. V.: Perturbation of ribosomal subunit dynamics by inhibitors of tRNA translocation. RNA 27 (9), pp. 981 - 990 (2021)
13.
Journal Article
Absmeier, E.; Vester, K.; Ghane, T.; Burakovskiy, D. E.; Milon, P.; Imhof, P.; Rodnina, M. V.; Santos, K. F.; Wahl, M. C.: Long-range allostery mediates cooperative adenine nucleotide binding by the Ski2-like RNA helicase Brr2. Journal of Biological Chemistry 297 (1), 100829 (2021)
14.
Journal Article
Mercier, E.; Wang, X.; Maiti, M.; Wintermeyer, W.; Rodnina, M. V.: Lateral gate dynamics of the bacterial translocon during cotranslational membrane protein insertion. Proceedings of the National Academy of Sciences of the USA 118 (26), e2100474118 (2021)
15.
Journal Article
Wohlgemuth, I.; Garofalo, R.; Samatova, E. N.; Günenç, A. N.; Lenz, C.; Urlaub, H.; Rodnina, M. V.: Translation error clusters induced by aminoglycoside antibiotics. Nature Communications 12, 1830 (2021)
16.
Journal Article
Ranjan, N.; Pochopien, A. A.; Wu, C. C.-C.; Beckert, B.; Blanchet, S.; Green, R.; Rodnina, M. V.; Wilson, D. N.: Yeast translation elongation factor eEF3 promotes late stages of tRNA translocation. EMBO Journal 40 (6), e106449 (2021)
17.
Journal Article
Zhang, Y.; Laurentiis, E. D.; Bohnsack, K. E.; Wahlig, M.; Ranjan, N.; Gruseck, S.; Hackert, P.; Wölfle, T.; Rodnina, M. V.; Schwappach, B. et al.; Rospert, S.: Ribosome-bound Get4/5 facilitates the capture of tail-anchored proteins by Sgt2 in yeast. Nature Communications 12, 782 (2021)
18.
Journal Article
Samatova, E. N.; Daberger, J.; Liutkute, M.; Rodnina, M. V.: Translational control by ribosome pausing in bacteria: How a non-uniform pace of translation affects protein production and folding. Frontiers in Microbiology 11, 619430 (2021)
19.
Journal Article
Lavdovskaia, E.; Denks, K.; Nadler, F.; Steube, E.; Linden, A.; Urlaub, H.; Rodnina, M. V.; Richter-Dennerlein, R.: Dual function of GTPBP6 in biogenesis and recycling of human mitochondrial ribosomes. Nucleic Acids Research 48 (22), pp. 12929 - 12942 (2020)
20.
Journal Article
Liutkute, M.; Maiti, M.; Samatova, E. N.; Enderlein, J.; Rodnina, M. V.: Gradual compaction of nascent peptide during cotranslational folding on the ribosome. eLife 9, e60895 (2020)
21.
Journal Article
Chan, K.-H.; Petrychenko, V.; Mueller, C.; Maracci, C.; Holtkamp, W.; Wilson, D. N.; Fischer, N.; Rodnina, M. V.: Mechanism of ribosome rescue by alternative ribosome-rescue factor B. Nature Communications 11, 4106 (2020)
22.
Journal Article
Mercier, E.; Wintermeyer, W.; Rodnina, M. V.: Co‐translational insertion and topogenesis of bacterial membrane proteins monitored in real time. EMBO Journal 39 (15), e104054 (2020)
23.
Journal Article
O'Loughlin, S.; Capece, M. C.; Klimova, M.; Wills, N. M.; Coakley, A.; Samatova, E. N.; O'Connor, P.k. B. F.; Loughran, G.; Weissman, J. S.; Baranov, P. V. et al.; Rodnina, M. V.; Puglisi, J.h. D.; Atkins, J. F.: Polysomes bypass a 50-nucleotide coding gap less efficiently than monosomes due to attenuation of a 5′ mRNA stem–loop and enhanced drop-off. Journal of Molecular Biology 432 (16), pp. 4369 - 4387 (2020)
24.
Journal Article
Rodnina, M. V.; Korniy, N.; Klimova, M.; Karki, P.; Peng, B. Z.; Senyushkina, T.; Belardinelli, R.; Maracci, C.; Wohlgemuth, I.; Samatova, E. N. et al.; Peske, F.: Translational recoding: Canonical translation mechanisms reinterpreted. Nucleic Acids Research 48 (3), pp. 1056 - 1067 (2020)
25.
Journal Article
Liutkute, M.; Samatova, E. N.; Rodnina, M. V.: Cotranslational folding of proteins on the ribosome. Biomolecules 10 (1), 97 (2020)
26.
Journal Article
Peng, B. Z.; Bock, L. V.; Belardinelli, R.; Peske, F.; Grubmüller, H.; Rodnina, M. V.: Active role of elongation factor G in maintaining the mRNA reading frame during translation. Science Advances 5 (12), eaax8030 (2019)
27.
Journal Article
Rodnina, M. V.; Peske, F.; Peng, B. Z.; Belardinelli, R.; Wintermeyer, W.: Converting GTP hydrolysis into motion: Versatile translational elongation factor G. Biological Chemistry 401 (1), pp. 131 - 142 (2019)
28.
Journal Article
Bock, L. V.; Caliskan, N.; Korniy, N.; Peske, F.; Rodnina, M. V.; Grubmüller, H.: Thermodynamic control of −1 programmed ribosomal frameshifting. Nature Communications 10, 4598 (2019)
29.
Journal Article
Korniy, N.; Samatova, E. N.; Anokhina, M. M.; Peske, F.; Rodnina, M. V.: Mechanisms and biomedical implications of –1 programmed ribosome frameshifting on viral and bacterial mRNAs. FEBS Letters 593 (13), pp. 1468 - 1482 (2019)
30.
Journal Article
Ranjan, N.; Leidel, S. A.: The epitranscriptome in translation regulation: mRNA and tRNA modifications as the two sides of the same coin? FEBS Letters 593 (13), pp. 1483 - 1493 (2019)
31.
Journal Article
Klimova, M.; Senyushkina, T.; Samatova, E. N.; Peng, B. Z.; Pearson, M.; Peske, F.; Rodnina, M. V.: EF-G-induced ribosome sliding along the noncoding mRNA. Science Advances 5 (6), eaaw9049 (2019)
32.
Journal Article
Korniy, N.; Goyal, A.; Hoffmann, M.; Samatova, E. N.; Peske, F.; Pöhlmann, S.; Rodnina, M. V.: Modulation of HIV-1 Gag/Gag-Pol frameshifting by tRNA abundance. Nucleic Acids Research 47 (10), pp. 5210 - 5222 (2019)
33.
Journal Article
Beissel , C.; Neumann, B.; Uhse, S.; Hampe , I.; Karki, P.; Krebber, H.: Translation termination depends on the sequential ribosomal entry of eRF1 and eRF3. Nucleic Acids Research 47 (9), pp. 4798 - 4813 (2019)
34.
Journal Article
Garofalo, R.; Wohlgemuth, I.; Pearson, M.; Lenz, C.; Urlaub, H.; Rodnina, M. V.: Broad range of missense error frequencies in cellular proteins. Nucleic Acids Research 47 (6), pp. 2932 - 2945 (2019)
35.
Journal Article
Girodat, D.; Mercier, E.; Gzyl, K. E.; Wieden, H. J.: Elongation factor Tu's nucleotide binding is governed by a thermodynamic landscape unique among bacterial translation factors. Journal of the American Chemical Society 141 (26), pp. 10236 - 10246 (2019)
36.
Journal Article
Haase, N.; Holtkamp, W.; Lipowsky, R.; Rodnina, M. V.; Rudorf, S.: Decomposition of time-dependent fluorescence signals reveals codon-specific kinetics of protein synthesis. Nucleic Acids Research 46 (22), e130 (2018)
37.
Journal Article
Matsumoto, S.; Calsikan, N.; Rodnina, M. V.; Murata, A.; Nakatani, K.: Small synthetic molecule-stabilized RNA pseudoknot as an activator for -1 ribosomal frameshifting. Nucleic Acids Research 46 (16), pp. 8079 - 8089 (2018)
38.
Journal Article
Zinoviev, A.; Goyal, A.; Jindal, S.; LaCava, J.; Komar, A. A.; Rodnina, M. V.; Hellen, C. U. T.; Pestova, T. V.: Functions of unconventional mammalian translational GTPases GTPBP1 and GTPBP2. Genes and Development 32 (17-18), pp. 1226 - 1241 (2018)
39.
Journal Article
Graf, M.; Huter, P.; Maracci, C.; Peterek, M.; Rodnina, M. V.; Wilson, D. N.: Visualization of translation termination intermediates trapped by the Apidaecin 137 peptide during RF3-mediated recycling of RF1. Nature Communications 9, 3053 (2018)
40.
Journal Article
Draycheva, A.; Lee, S.; Wintermeyer, W.: Cotranslational protein targeting to the membrane: Nascent-chain transfer in a quaternary complex formed at the translocon. Scientific Reports 8 (1), 9922 (2018)
41.
Journal Article
Mercier, E.; Rodnina, M. V.: Co-translational folding trajectory of the HemK helical domain. Biochemistry 57 (25), pp. 3460 - 3464 (2018)
42.
Journal Article
Adio, S.; Sharma, H.; Senyushkina, T.; Karki, P.; Maracci, C.; Wohlgemuth, I.; Holtkamp, W.; Peske, F.; Rodnina, M. V.: Dynamics of ribosomes and release factors during translation termination in E-coli. eLife 7, e34252 (2018)
43.
Journal Article
Andreeva, I.; Belardinelli, R.; Rodnina, M. V.: Translation initiation in bacterial polysomes through ribosome loading on a standby site on a highly translated mRNA. Proceedings of the National Academy of Sciences of the United States of America 115 (17), pp. 4411 - 4416 (2018)
44.
Journal Article
Rodnina, M. V.: Translation in prokaryotes. Cold Spring Harbor Perspectives in Biology 10 (9), a032664 (2018)
45.
Journal Article
Blanchet, S.; Cornu, D.; Hatin, I.; Grosjean, H.; Bertin, P.; Namy, O.: Deciphering the reading of the genetic code by near-cognate tRNA. Proceedings of the National Academy of Sciences of the United States of America 115 (12), pp. 3018 - 3023 (2018)
46.
Journal Article
Mercier, E.; Holtkamp, W.; Rodnina, M. V.; Wintermeyer, W.: Signal recognition particle binds to translating ribosomes before emergence of a signal anchor sequence. Nucleic Acids Research 45 (20), pp. 11858 - 11866 (2017)
47.
Journal Article
Huter, P.; Arenz, S.; Bock, L. V.; Graf, M.; Frister, J. O.; Heuer, A.; Peil, L.; Starosta, A. L.; Wohlgemuth, I.; Peske, F. et al.; Nováček, J.; Berninghausen, O.; Grubmüller, H.; Tenson, T.; Beckmann, R.; Rodnina, M. V.; Vaiana, A. C.; Wilson, D. N.: Structural basis for polyproline-mediated ribosome stalling and rescue by the translation elongation factor EF-P. Molecular Cell 68 (3), pp. 515 - 527 (2017)
48.
Journal Article
Goyal, A.; Belardinelli, R.; Rodnina, M. V.: Non-canonical binding site for bacterial initiation factor 3 on the large ribosomal subunit. Cell Reports 20 (13), pp. 3113 - 3122 (2017)
49.
Journal Article
Belardinelli, R.; Rodnina, M. V.: Effect of fusidic acid on the kinetics of molecular motions during EF-G-induced translocation on the ribosome. Scientific Reports 7, 10536 (2017)
50.
Journal Article
Florin, T.; Maracci, C.; Graf, M.; Karki, P.; Klepacki, D.; Berninghausen, O.; Beckmann, R.; Vazquez-Laslop, N.; Wilson, D. N.; Rodnina, M. V. et al.; Mankin, A. S.: An antimicrobial peptide that inhibits translation by trapping release factor trap. Nature Structural and Molecular Biology 24 (9), pp. 752 - 757 (2017)
51.
Journal Article
Agirrezabala, X.; Samatova, E. N.; Klimova, M.; Zamora, M.; Gil-Carton, D.; Rodnina, M. V.; Valle, M.: Ribosome rearrangements at the onset of translational bypassing. Science Advances 3 (6), e1700147 (2017)
52.
Journal Article
Caliskan, N.; Wohlgemuth, I.; Korniy, N.; Pearson, M.; Peske, F.; Rodnina, M. V.: Conditional switch between frameshifting regimes upon translation of dnaX mRNA. Molecular Cell 66 (4), pp. 558 - 567 (2017)
53.
Journal Article
Ranjan, A.; Mercier, E.; Bhatt, A.; Wintermeyer, W.: Signal recognition particle prevents N-terminal processing of bacterial membrane proteins. Nature Communications 8, 15562 (2017)
54.
Journal Article
Ranjan, N.; Rodnina, M. V.: Thio-modification of tRNA at the wobble position as regulator of the kinetics of decoding and translocation on the ribosome. Journal of the American Chemical Society 139 (16), pp. 5857 - 5864 (2017)
55.
Journal Article
Rodnina, M. V.; Fischer, N.; Maracci, C.; Stark, H.: Ribosome dynamics during decoding. Philosophical Transactions of the Royal Society B 372 (1716), 20160182 (2017)
56.
Journal Article
Thommen, M.; Holtkamp, W.; Rodnina, M. V.: Co-translational protein folding: Progress and methods. Current Opinion in Structural Biology 42, pp. 83 - 89 (2017)
57.
Journal Article
Fischer, N.; Neumann, P.; Bock, l. V.; Maracci, C.; Wang, Z.; Paleskava, A.; Konevega, A. L.; Schröder, G. F.; Grubmüller, H.; Ficner, R. et al.; Rodnina, M. V.; Stark, H.: The pathway to GTPase activation of elongation factor SelB on the ribosome. Nature 540 (7631), pp. 80 - 85 (2016)
58.
Journal Article
Haag, S.; Sloan, K. E.; Ranjan, N.; Warda, A. S.; Kretschmer, J.; Blessing, C.; Hübner, B.; Seikowski, J.; Dennerlein, S.; Rehling, P. et al.; Rodnina, M. V.; Höbartner, C.; Bohnsack, M. T.: NSUN3 and ABH1 modify the wobble position of mt-tRNAMet to expand codon recognition in mitochondrial translation. The EMBO Journal 35 (19), pp. 2104 - 2119 (2016)
59.
Journal Article
Draycheva, A.; Bornemann, T.; Ryazanov, S.; Lakomek, N. A.; Wintermeyer, W.: The bacterial SRP receptor, FtsY, is activated on binding to the translocon. Molecular Microbiology 102 (1), pp. 152 - 167 (2016)
60.
Journal Article
Sharma, H.; Adio, S.; Senyushkina, T.; Belardinelli, R.; Peske, F.; Rodnina, M. V.: Kinetics of spontaneous and EF-G-accelerated rotation of ribosomal subunits. Cell Reports 16 (8), pp. 2187 - 2196 (2016)
61.
Journal Article
Lakomek, N. A.; Draycheva, A.; Bornemann, T.; Wintermeyer, W.: Electrostatics and intrinsic disorder drive translocon binding of the SRP receptor FtsY. Angewandte Chemie International Edition 55 (33), pp. 9544 - 9547 (2016)
62.
Journal Article
Maracci, C.; Rodnina, M. V.: Translational GTPases. Biopolymers 105 (8), pp. 463 - 475 (2016)
63.
Journal Article
Rodnina, M. V.: The ribosome in action: Tuning of translational efficiency and protein folding. Protein Science 25 (8), pp. 1390 - 1406 (2016)
64.
Journal Article
Katoh, T.; Wohlgemuth, I.; Nagano, M.; Rodnina, M. V.; Suga, H.: Essential structural elements in tRNAPro for EF-P-mediated alleviation of translation stalling. Nature Communications 7, 11657 (2016)
65.
Journal Article
Rodnina, M. V.; Wintermeyer, W.: Protein elongation, co-translational folding and targeting. Journal of Molecular Biology 428 (10, P. B), pp. 2165 - 2185 (2016)
66.
Journal Article
Fabbretti, A.; Schedlbauer, A.; Brandi, L.; Kaminishi, T.; Giuliodori, A. M.; Garofalo, R.; Ochoa-Lizarralde, B.; Takemoto, C.; Yokoyama, S.; Connell, S. R. et al.; Gualerzi, C. O.; Fucini, P.: Inhibition of translation initiation complex formation by GE81112 unravels a 16S rRNA structural switch involved in P-site decoding. Proceedings of the National Academy of Sciences of the United States of America 113 (16), pp. E2286 - E2295 (2016)
67.
Journal Article
Belardinelli, R.; Sharma, H.; Caliskan, N.; da Cunha, C. E. L.; Peske, F.; Wintermeyer, W.; Rodnina, M. V.: Choreography of molecular movements during ribosome progression along mRNA. Nature Structural and Molecular Biology 23 (4), pp. 342 - 348 (2016)
68.
Journal Article
Buhr, F.; Jha, S.; Thommen, M.; Mittelstät, J.; Kutz, F.; Schwalbe, H.; Rodnina, M. V.; Komar, A. A.: Synonymous codons direct cotranslational folding toward different protein conformations. Molecular Cell 61 (3), pp. 341 - 351 (2016)
69.
Journal Article
Ranjan, N.; Rodnina, M. V.: tRNA wobble modifications and protein homeostasis. Translation 4 (1), e1143076 (2016)
70.
Journal Article
Belardinelli, R.; Sharma, H.; Peske, F.; Wintermeyer, W.; Rodnina, M. V.: Translocation as continuous movement through the ribosome. RNA Biology 13 (12), pp. 1197 - 1203 (2016)
71.
Journal Article
Goyal, A.; Belardinelli, R.; Maracci, C.; Milon, P.; Rodnina, M. V.: Directional transition from initiation to elongation in bacterial translation. Nucleic Acids Research 43 (22), pp. 10700 - 10712 (2015)
72.
Journal Article
Druzhinin, S. I.; Galievsky, V. A.; Demeter, A.; Kovalenko, S. A.; Senyushkina, T.; Dubbaka, S. R.; Knoche, P.; Mayer, P.; Grosse, C.; Stalke, D. et al.; Zachariasse, K. A.: Two-state intramolecular charge transfer (ICT) with 3,5-dimethyl-4(dimethylamino)benzonitrile (MMD) and its meta-isomer mMMD. Ground state amino twist not essential for ICT. Journal of Physical Chemistry A 119 (49), pp. 11820 - 11836 (2015)
73.
Journal Article
Maracci, C.; Wohlgemuth, I.; Rodnina, M. V.: Activities of the peptidyl transferase center of ribosomes lacking protein L27. RNA 21 (12), pp. 2047 - 2052 (2015)
74.
Journal Article
Holtkamp, W.; Kokic, G.; Jäger, M.; Mittelstät, J.; Komar, A.; Rodnina, M. V.: Cotranslational protein folding on the ribosome monitored in real time. Science 250 (6264), pp. 1104 - 1107 (2015)
75.
Journal Article
Dörfel, L. K.; Wohlgemuth, I.; Kubyshkin, V.; Starosta, A. L.; Wilson, D. N.; Budisa, N.; Rodnina, M. V.: Entropic contribution of elongation factor P to proline positioning at the catalytic center of the ribosome. Journal of the American Chemical Society 137 (40), pp. 12997 - 13006 (2015)
76.
Journal Article
Kuhn, P.; Draycheva, A.; Vogt, A.; Petriman, N. A.; Sturm, L.; Drepper, F.; Warscheid, B.; Wintermeyer, W.; Koch, H. G.: Ribosome binding induces repositioning of the signal recognition particle receptor on the translocon. Journal of Cell Biology 211 (1), pp. 91 - 104 (2015)
77.
Journal Article
Kotini, S. B.; Peske, F.; Rodnina, M. V.: Partitioning between recoding and termination at a stop codon-selenocysteine insertion sequence. Nucleic Acids Research 43 (13), pp. 6426 - 6438 (2015)
78.
Journal Article
Adio, S.; Senyushkina, T.; Peske, F.; Fischer, N.; Wintermeyer, W.; Rodnina, M. V.: Fluctuations between multiple EF-G-induced chimeric tRNA states during translocation on the ribosome. Nature Communications 6, 7442 (2015)
79.
Journal Article
Byrne, R. T.; Jenkins, H. T.; Peters, D. T.; Whelan, F.; Stowell, J.; Aziz, N.; Kasatzky, P.; Rodnina, M. V.; Koonin, E. V.; Konevega, A. L. et al.; Antson, A. A.: Major reorientation of tRNA substrates defines specificity of dihydrouridine synthases. Proceedings of the National Academy of Sciences of the United States of America 112 (19), pp. 6033 - 6037 (2015)
80.
Journal Article
Caliskan, N.; Peske, F.; Rodnina, M. V.: Changed in translation: mRNA recoding by −1 programmed ribosomal frameshifting. Trends in Biochemical Sciences 40 (5), pp. 265 - 274 (2015)
81.
Journal Article
Fischer, N.; Neumann, P.; Konevega, A. L.; Bock, L. V.; Ficner, R.; Rodnina, M. V.; Stark, H.: Structure of the E. coli ribosome–EF-Tu complex at <3 Å resolution by Cs-corrected cryo-EM. Nature 520 (7548), pp. 567 - 570 (2015)
82.
Journal Article
Wohlgemuth, I.; Lenz, C.; Urlaub, H.: Studying macromolecular complex stoichiometries by peptide-based mass spectrometry. Proteomics 15 (5-6), pp. 862 - 879 (2015)
83.
Journal Article
Polikanov, Y. S.; Osterman, I. A.; Szal, T.; Tashlitsky, V. N.; Serebryakova, M. V.; Kusochek, P.; Bulkley, D.; Malanicheva, I. A.; Efimenko, T. A.; Efremenkova, O. V. et al.; Konevega, A. L.; Shaw, k.J.; Bogdanov, A. A.; Rodnina, M. V.; Dontsova, O. A.; Mankin, A. S.; Steitz, T. A.; Sergiev, P. V.: Amicoumacin a inhibits translation by stabilizing mRNA interaction with the ribosome. Molecular Cell 56 (4), pp. 531 - 540 (2014)
84.
Journal Article
Rudorf, S.; Thommen, M.; Rodnina, M. V.; Lipowsky, R.: Deducing the kinetics of protein synthesis in vivo from the transition rates measured in vitro. PLoS Computational Biology 10 (10), e1003909 (2014)
85.
Journal Article
Ge, Y.; Draycheva, A.; Bornemann, T.; Rodnina, M. V.; Wintermeyer, W.: Lateral opening of the bacterial translocon on ribosome binding and signal peptide insertion. Nature Communications 5, 5263 (2014)
86.
Journal Article
Maracci, C.; Peske, F.; Dannies, E.; Pohl, C.; Rodnina, M. V.: Ribosome-induced tuning of GTP hydrolysis by a translational GTPase. Proceedings of the National Academy of Sciences of the United States of America 111 (40), pp. 14418 - 14423 (2014)
87.
Journal Article
Holtkamp, W.; Wintermeyer, W.; Rodnina, M. V.: Synchronous tRNA movements during translocation on the ribosome are orchestrated by elongation factor G and GTP hydrolysis. BioEssays 36 (10), pp. 908 - 918 (2014)
88.
Journal Article
Garreau de Loubresse, N.; Prokhorova, I.; Holtkamp, W.; Rodnina, M. V.; Yusupova , G.; Yusupov, M.: Structural basis for the inhibition of the eukaryotic ribosome. Nature 513 (7519), pp. 517 - 522 (2014)
89.
Journal Article
Samatova, E. N.; Konevega, A. L.; Wills, N. M.; Atkins, J. F.; Rodnina, M. V.: High-efficiency translational bypassing of non-coding nucleotides specified by mRNA structure and nascent peptide. Nature communications 5, 4459 (2014)
90.
Journal Article
Caliskan, N.; Katunin, V. I.; Belardinelli, R.; Peske, F.; Rodnina, M. V.: Programmed –1 frameshifting by kinetic partitioning during impeded translocation. Cell 157 (7), pp. 1619 - 1631 (2014)
91.
Journal Article
Bornemann, T.; Holtkamp, W.; Wintermeyer, W.: Interplay between trigger factor and other protein biogenesis factors on the ribosome. Nature Communications 5, 4180 (2014)
92.
Journal Article
Holtkamp, W.; da Cunha, C. E. L.; Peske, F.; Konevega, A. L.; Wintermeyer, W.; Rodnina, M. V.: GTP hydrolysis by EF‐G synchronizes tRNA movement on small and large ribosomal subunits. EMBO Journal 33 (9), pp. 1073 - 1085 (2014)
93.
Journal Article
Peske, F.; Kuhlenkötter, S.; Rodnina, M. V.; Wintermeyer, W.: Timing of GTP binding and hydrolysis by translation termination factor RF3. Nucleic Acids Research 42 (3), pp. 1812 - 1820 (2014)
94.
Journal Article
Bock, L. V.; Blau, C.; Schröder, G. F.; Davydov, I. I.; Fischer, N.; Stark, H.; Rodnina, M. V.; Vaiana, A. C.; Grubmüller, H.: Energy barriers and driving forces in tRNA translocation through the ribosome. Nature Structural and Molecular Biology 20 (12), pp. 1390 - 1396 (2013)
95.
Journal Article
Dörfel, L. K.; Rodnina, M. V.: Elongation factor P: Function and effects on bacterial fitness. Biopolymers 99 (11), pp. 837 - 845 (2013)
96.
Journal Article
Mittelstät, J.; Konevega, A. L.; Rodnina, M. V.: A kinetic safety gate controlling the delivery of unnatural amino acids to the ribosome. Journal of the American Chemical Society 135 (45), pp. 17031 - 17038 (2013)
97.
Journal Article
Rodnina, M. V.: The ribosome as a versatile catalyst: Reactions at the peptidyl transferase center. Current Opinion in Structural Biology 23 (4), pp. 595 - 602 (2013)
98.
Journal Article
Rezgui, V. A. N.; Kshitiz, T.; Namit, R.; Konevega, A. L.; Mittelstät, J.; Rodnina, M. V.; Peter, M.; Pedrioli, P. G. A.: tRNA tKUUU, tQUUG, and tEUUC wobble position modifications fine-tune protein translation by promoting ribosome A-site binding. Proceedings of the National Academy of Sciences of the United States of America 110 (30), pp. 12289 - 12294 (2013)
99.
Journal Article
Rodnina, M. V.: Translocation in action. Science 340 (6140), pp. 1534 - 1535 (2013)
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