Zeitschriftenartikel (121)
51.
Zeitschriftenartikel
Structure of Ctk3, a subunit of the RNA polymerase II CTD kinase complex, reveals a non-canonical CTD-interacting domain fold. Proteins: Structure, Function, and Bioinformatics 83 (10), S. 1849 - 1858 (2015)
52.
Zeitschriftenartikel
Context similarity scoring improves protein sequence alignments in the midnight zone. Bioinformatics 31 (5), S. 674 - 681 (2015)
53.
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bbcontacts: Prediction of β-strand pairing from direct coupling patterns. Bioinformatics 31 (11), S. 1729 - 1737 (2015)
54.
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CCMpred-fast and precise prediction of protein residue-residue contacts from correlated mutations. Bioinformatics 30 (21), S. 3128 - 3130 (2014)
55.
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Transcriptome maps of mRNP biogenesis factors define pre-mRNA recognition. Molecular Cell 55 (5), S. 745 - 757 (2014)
56.
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Universality of core promoter elements? Nature 511 (7510), S. E11 - E12 (2014)
57.
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A structural model of the active ribosome-bound membrane protein insertase YidC. eLife 3, e03035 (2014)
58.
Zeitschriftenartikel
RECQL5 controls transcript elongation and suppresses genome instability associated with transcription stress. Cell 157 (5), S. 1037 - 1049 (2014)
59.
Zeitschriftenartikel
In vivo ligands of MDA5 and RIG-I in measles virus-infected cells. PLoS Pathogens 10 (4), e1004081 (2014)
60.
Zeitschriftenartikel
In silico-Funktions- und Strukturvorhersagen bei Proteinen. BIOspektrum 20 (2), S. 158 - 160 (2014)
61.
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Recruitment of TREX to the transcription machinery by its direct binding to the phospho-CTD of RNA polymerase II. PLoS Genetics 9 (11), e1003914 (2013)
62.
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Transcriptome surveillance by selective termination of noncoding RNA synthesis. Cell 155 (5), S. 1075 - 1087 (2013)
63.
Zeitschriftenartikel
kClust: Fast and sensitive clustering of large protein sequence databases. BMC Bioinformatics 14, 248 (2013)
64.
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P-value-based regulatory motif discovery using positional weight matrices. Genome Research 23 (1), S. 181 - 194 (2013)
65.
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Eph receptors and ephrin class B ligands are expressed at tissue boundaries in Hydra vulgaris. The International Journal of Develomental Biology 57, S. 759 - 765 (2013)
66.
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Discriminative modelling of context-specific amino acid substitution probabilities. Bioinformatics 28 (24), S. 3240 - 3247 (2012)
67.
Zeitschriftenartikel
DBIRD complex integrates alternative mRNA splicing with RNA polymerase II transcript elongation. Nature 484 (7394), S. 386 - 389 (2012)
68.
Zeitschriftenartikel
The MOF-containing NSL complex associates globally with housekeeping genes, but activates only a defined subset. Nucleic Acids Research 40 (4), S. 1509 - 1522 (2012)
69.
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The XXmotif web server for eXhaustive, weight matriX-based motif discovery in nucleotide sequences. Nucleic Acids Research 40 (W1), S. W104 - W109 (2012)
70.
Zeitschriftenartikel
HHblits: Lightning-fast iterative protein sequence searching by HMM-HMM alignment. Nature Methods 9 (2), S. 173 - 175 (2012)
71.
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A conserved GA element in TATA-less RNA polymerase II promoters. PLoS One 6 (11), e27595 (2011)
72.
Zeitschriftenartikel
Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega. Molecular Systems Biology 7, 539 (2011)
73.
Zeitschriftenartikel
Protein sequence comparison and fold recognition: progress and good-practice benchmarking. Current Opinion in Structural Biology 21 (3), S. 404 - 411 (2011)
74.
Zeitschriftenartikel
Different binding properties and function of CXXC zinc finger domains in Dnmt1 and Tet1. PLoS One 6 (2), e16627 (2011)
75.
Zeitschriftenartikel
The Mre11:Rad50 structure shows an ATP-dependent molecular clamp in DNA double-strand break repair. Cell 145 (1), S. 54 - 66 (2011)
76.
Zeitschriftenartikel
Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-angstrom resolution. Proceedings of the National Academy of Sciences of the United States of America 107 (46), S. 19748 - 19753 (2010)
77.
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Localization of eukaryote-specific ribosomal proteins in a 5.5-angstrom cryo-EM map of the 80S eukaryotic ribosome. Proceedings of the National Academy of Sciences of the United States of America 107 (46), S. 19754 - 19759 (2010)
78.
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Of bits and bugs - On the use of bioinformatics and a bacterial crystal structure to solve a eukaryotic repeat-protein structure. PLoS One 5 (10), e13402 (2010)
79.
Zeitschriftenartikel
Uniform transitions of the general RNA polymerase II transcription complex. Nature Structural and Molecular Biology 17 (10), S. 1272 - 1278 (2010)
80.
Zeitschriftenartikel
A galaxy of folds. Protein Science 19 (1), S. 124 - 130 (2010)
81.
Zeitschriftenartikel
The molecular cell death machinery in the simple cnidarian Hydra includes an expanded caspase family and pro- and anti-apoptotic Bcl-2 proteins. Cell Research 20 (7), S. 812 - 825 (2010)
82.
Zeitschriftenartikel
Evolution of outer membrane beta-barrels from an ancestral beta beta hairpin. Molecular Biology and Evolution 27 (6), S. 1348 - 1358 (2010)
83.
Zeitschriftenartikel
Sequence context-specific profiles for homology searching. Proceedings of the National Academy of Sciences of the United States of America 106 (10), S. 3770 - 3775 (2009)
84.
Zeitschriftenartikel
Phospholipid scramblases and Tubby-like proteins belong to a new superfamily of membrane tethered transcription factors. Bioinformatics 25 (2), S. 159 - 162 (2009)
85.
Zeitschriftenartikel
A boost for sequence searching. G.I.T. Laboratory Journal 9-10, S. 22 - 23 (2009)
86.
Zeitschriftenartikel
Fast and accurate automatic structure prediction with HHpred. Proteins: Structure, Function, and Bioinformatics 77 (S9), S. 128 - 132 (2009)
87.
Zeitschriftenartikel
HHomp-prediction and classification of outer membrane proteins. Nucleic Acids Research 37 (Suppl. 2), S. W446 - W451 (2009)
88.
Zeitschriftenartikel
PDBalert: Automatic, recurrent remote homology tracking and protein structure prediction. BMC Structural Biology 8, 51 (2008)
89.
Zeitschriftenartikel
Genome-associated RNA polymerase II includes the dissociable Rpb4/7 subcomplex. The Journal of Biological Chemistry 283, S. 26423 - 26427 (2008)
90.
Zeitschriftenartikel
Evolution of the beta-propeller fold. Proteins: Structure, Function, and Bioinformatics 71 (2), S. 795 - 803 (2008)
91.
Zeitschriftenartikel
De novo identification of highly diverged protein repeats by probabilistic consistency. Bioinformatics 24 (6), S. 807 - 814 (2008)
92.
Zeitschriftenartikel
Prediction of protein functional residues from sequence by probability density estimation. Bioinformatics 24 (5), S. 613 - 620 (2008)
93.
Zeitschriftenartikel
ScbA from Streptomyces coelicolor A3(2) has homology to fatty acid synthases and is able to synthesize-butyrolactones. Microbiology/SGM 153 (5), S. 1394 - 1404 (2007)
94.
Zeitschriftenartikel
On the origin of the histone fold. BMC Structural Biology 7, 17 (2007)
95.
Zeitschriftenartikel
TPRpred: A tool for prediction of TPR-, PPR- and SELI-like repeats from protein sequences. BMC Bioinformatics 8, 2 (2007)
96.
Zeitschriftenartikel
Comparative analysis of coiled-coil prediction methods. Journal of Structural Biology 155 (2), S. 140 - 145 (2006)
97.
Zeitschriftenartikel
The MPI Bioinformatics toolkit for protein sequence analysis. Nucleic Acids Research (London) 34, S. W335 - W339 (2006)
98.
Zeitschriftenartikel
HHrep: de novo protein repeat detection and the origin of TIM barrels. Nucleic Acids Research (London) 34, S. W137 - W142 (2006)
99.
Zeitschriftenartikel
HHsenser: Exhaustive transitive profile search using HMM-HMM comparison. Nucleic Acids Research (London) 34, S. W374 - W378 (2006)
100.
Zeitschriftenartikel
Expression, crystallization and preliminary X-ray crystallographic studies of the outer membrane protein OmpW from Escherichia coli. Acta Crystallographica Section F: Structural Biology and Crystallization Communications 62 (4), S. 415 - 418 (2006)