Publications

Journal Article (399)

1.
Journal Article
Qiu, H.; Wu, X.; Ma, X.; Li, S.; Cai, Q.; Ganzella, M.; Ge, L.; Zhang, H.; Zhang, M.: Short-distance vesicle transport via phase separation. Cell 187, pp. 1 - 19 (2024)
2.
Journal Article
Koike, S.; Jahn, R.: Rab GTPases and phosphoinositides fine-tune SNAREs dependent targeting specificity of intracellular vesicle traffic. Nature Communications 15 (1), 2508 (2024)
3.
Journal Article
Cepeda, A. P.; Ninov, M.; Neef, J.; Parfentev, I.; Kusch, K.; Reisinger, E.; Jahn, R.; Moser, T.; Urlaub, H.: Proteomic Analysis Reveals the Composition of Glutamatergic Organelles of Auditory Inner Hair Cells. Molecular & Cellular Proteomics 23 (2), 100704 (2024)
4.
Journal Article
Zhao, Y.; Fang, Q.; Sharma, S.; Jakhanwal, S.; Jahn, R.; Lindau, M.: All SNAP25 molecules in the vesicle–plasma membrane contact zone change conformation during vesicle priming. Proceedings of the National Academy of Sciences of the United States of America 121 (2), e2309161121 (2024)
5.
Journal Article
Alfken, J.; Neuhaus, C.; Major, A.; Taskina, A.; Hoffmann, C.; Ganzella, M.; Petrovic, A.; Zwicker, D.; Fernández-Busnadiego, R.; Jahn, R. et al.; Milovanovic, D.; Salditt, T.: Vesicle condensation induced by synapsin: condensate size, geometry, and vesicle shape deformations. European Physical Journal E 47 (1), 8 (2024)
6.
Journal Article
Jahn, R.; Cafiso, D. C.; Tamm, L. K.: Mechanisms of SNARE proteins in membrane fusion. Nature Reviews Molecular Cell Biology 25, pp. 101 - 118 (2024)
7.
Journal Article
Altas, B.; Tuffy, L. P.; Patrizi, A.; Dimova, K.; Soykan, T.; Brandenburg, C.; Romanowski, A. J.; Whitten, J. R.; Robertson, C. D.; Khim, S. N. et al.; Crutcher, G. W.; Ambrozkiewicz, M.; Yagensky, O.; Krüger-Burg, D. D.; Hammer, M.; Hsiao, H.-H.; Laskowski, P. R.; Dyck, L.; Puche, A. C.; Sassoè-Pognetto, M.; Chua, J. J. E.; Urlaub, H.; Jahn, O.; Brose, N.; Poulopoulos, A.: Region-Specific Phosphorylation Determines Neuroligin-3 Localization to Excitatory versus Inhibitory Synapses. Biological Psychiatry, in press (2023)
8.
Journal Article
Binotti, B.; Ninov, M.; Cepeda, A. P.; Ganzella, M.; Matti, U.; Riedel, D.; Urlaub, H.; Sambandan, S.; Jahn, R.: ATG9 resides on a unique population of small vesicles in presynaptic nerve terminals. Autophagy (2023)
9.
Journal Article
Hoffmann, C.; Rentsch, J.; Tsunoyama, T.A.; Chhabra, A.; Aguilar Perez, G.; Chowdhury, R.; Trnka, F.; Korobeinikov, A.A.; Shaib, A.H.; Ganzella, M. et al.; Giannone, G.; Rizzoli, S.O.; Kusumi, A.; Ewers, H.; Milovanovic, D.: Synapsin condensation controls synaptic vesicle sequestering and dynamics. Nature Communications 14 (1), 6730 (2023)
10.
Journal Article
Stief, T.; Gremer, L.; Pribicevic, S.; Espinueva, D. F.; Vormann, K.; Biehl, R.; Jahn, R.; Pérez-Lara, Á.; Lakomek, N.-A.: Intrinsic Disorder of the Neuronal SNARE Protein SNAP25a in its Pre-fusion Conformation. Journal of Molecular Biology 435 (10), 168069 (2023)
11.
Journal Article
Roig Adam, A.; Martínez-López, J.A.; van der Spek, S.J.F.; Achsel, T.; Andres-Alonso, M.; Bagni, C.; Bayés, À.; Biederer, T.; Brose, N.; Chua, J.J.E. et al.; Coba, M.P.; Cornelisse, L.N.; de Juan-Sanz, J.; Goldschmidt, H.L.; Gundelfinger, E.D.; Huganir, R.L.; Imig, C.; Jahn, R.; Jung, H.; Kaeser, P.S.; Kim, E.; Koopmans, F.; Kreutz, M.R.; Lipstein, N.; MacGillavry, H.D.; McPherson, P.S.; O’Connor, V.; Pielot, R.; Ryan, T.A.; Sala, C.; Sheng, M.; Smalla, K.-H.; Thomas, P.D.; Toonen, R.F.; van Weering, J.R.T.; Verpelli, C.; Sullivan, P.F.; Smit, A.B.; Verhage, M.; Hjerling-Leffler, J.: Transcriptional diversity in specific synaptic gene sets discriminates cortical neuronal identity. Biology Direct 18, 22 (2023)
12.
Journal Article
Kosmidis, E.; Shuttle, C. G.; Preobraschenski, J.; Ganzella, M.; Johnson, P. J.; Veshaguri, S.; Holmkvist, J.; Moller, M. P.; Marantos, O.; Marcoline, F. et al.; Grabe, M.; Pedersen, J. L.; Jahn, R.; Stamou, D.: Regulation of the mammalian-brain V-ATPase through ultraslow mode-switching. Nature 611 (7937), pp. 827 - 834 (2022)
13.
Journal Article
Weber, M.; von der Emde, H.; Leutenegger, M.; Gunkel, P.; Sambandan, S.; Khan, T. A.; Keller-Findeisen, J.; Cordes, V. C.; Hell, S. W.: MINSTED nanoscopy enters the Ångström localization range. Nature Biotechnology (2022)
14.
Journal Article
Birinci, Y.; Preobraschenski, J.; Ganzella, M.; Jahn, R.; Park, Y.: Author Correction: Isolation of large dense-core vesicles from bovine adrenal medulla for functional studies. Scientific Reports 12, 16738 (2022)
15.
Journal Article
Komorowski, K.; Preobraschenski, J.; Ganzella, M.; Alfken, J.; Neuhaus, C.; Jahn, R.; Salditt, T.: Neurotransmitter uptake of synaptic vesicles studied by X-ray diffraction. European Biophysics Journal 51, pp. 465 - 482 (2022)
16.
Journal Article
Upmanyu, N.; Jin, J.; von der Emde, H.; Ganzella, M.; Bösche, L.; Malviya, V. N.; Zhuleku, E.; Politi, A. Z.; Ninov, M.; Silbern, I. et al.; Leutenegger, M.; Urlaub, H.; Riedel, D.; Preobraschenski, J.; Milosevic, I.; Hell, S. W.; Jahn, R.; Sambandan, S.: Colocalization of different neurotransmitter transporters on synaptic vesicles is sparse except for VGLUT1 and ZnT3. Neuron 110 (9), pp. 1483 - 1497 (2022)
17.
Journal Article
Chang, H.-F.; Schirra, C.; Ninov, M.; Hahn, U.; Ravichandran, K.; Krause, E.; Becherer, U.; Bálint, Š.; Harkiolaki, M.; Urlaub, H. et al.; Valitutti, S.; Baldari, C. T.; Dustin, M. L.; Jahn, R.; Rettig, J.: Identification of distinct cytotoxic granules as the origin of supramolecular attack particles in T lymphocytes. Nature Communications 13, 1029 (2022)
18.
Journal Article
Koike, S.; Jahn, R.: SNARE proteins: zip codes in vesicle targeting? Biochemical Journal 479 (3), pp. 273 - 288 (2022)
19.
Journal Article
Mühlhausen, S.; Schmitt, H. D.; Plessmann, U.; Mienkus, P.; Sternisek, P.; Perl, T.; Weig, M.; Urlaub, H.; Bader, O.; Kollmar, M.: Proteogenomics analysis of CUG codon translation in the human pathogen Candida albicans. BMC Biology 19, 258 (2021)
20.
Journal Article
Binotti, B.; Jahn, R.; Pérez-Lara, A.: An overview of the synaptic vesicle lipid composition. Archives of Biochemistry and Biophysics 709, 108966 (2021)
21.
Journal Article
Chen, Y.; Vos, S. M.; Dienemann, C.; Ninov, M.; Urlaub, H.; Cramer, P.: Allosteric transcription stimulation by RNA polymerase II super elongation complex. Molecular Cell 81 (16), pp. 3386 - 3399.e10 (2021)
22.
Journal Article
Juranek, J. K.; Mukherjee, K.; Jahn, R.; Li, J.-Y.: Coordinated bi-directional trafficking of synaptic vesicle and active zone proteins in peripheral nerves. Biochemical and Biophysical Research Communications 559, pp. 92 - 98 (2021)
23.
Journal Article
Witkowska, A.; Heinz, L. P.; Grubmüller, H.; Jahn, R.: Tight docking of membranes before fusion represents a novel, metastable state with unique properties. Nature Communications 12, 3606 (2021)
24.
Journal Article
Kim, C.; Shon, M. J.; Kim, S. H.; Eun, G. S.; Ryu, J.-K.; Hyeon, C.; Jahn, R.; Yoon, T.-Y.: Extreme parsimony in ATP consumption by 20S complexes in the global disassembly of single SNARE complexes. Nature Communications 12, 3206 (2021)
25.
Journal Article
Grothe, T.; Nowak, J.; Jahn, R.; Walla, P. J.: Selected tools to visualize membrane interactions. European Biophysics Journal 50 (2), pp. 211 - 222 (2021)
26.
Journal Article
Wittig, S.; Ganzella, M.; Kostmann, S.; Barth, M.; Riedel, D.; Perez-Lara, A.; Jahn, R.; Schmidt, C.: Cross-linking mass spectrometry uncovers protein interactions and functional assemblies in synaptic vesicle membranes. Nature Communications 12, 858 (2021)
27.
Journal Article
Wu, X.; Ganzella, M.; Zhou, J.; Zhu, S.; Jahn, R.; Zhang, M.: Vesicle tethering on the surface of phase-separated active zone condensates. Molecular Cell 81 (1), pp. 13 - 24.e7 (2021)
28.
Journal Article
Silbern, I.; Pan, K. T.; Fiosins, M.; Bonn, S.; Rizzoli, S. O.; Fornasiero, E. F.; Urlaub, H.; Jahn, R.: Protein phosphorylation in depolarized synaptosomes: Dissecting primary effects of calcium from synaptic vesicle cycling. Molecular and Cellular Proteomics 20, 100061 (2021)
29.
Journal Article
Birinci, Y.; Preobraschenski, J.; Ganzella, M.; Jahn, R.; Park, Y.: Isolation of large dense-core vesicles from bovine adrenal medulla for functional studies. Scientific Reports 10, 7540 (2020)
30.
Journal Article
Luck, R.; Urban, S.; Karakatsani, A.; Harde, E.; Sambandan, S.; Nicholson, L.; Haverkamp, S.; Mann, R.; Martin-Villalba, A.; Schuman, E. M. et al.; Acker-Palmer, A.; de Almodovar, C. R.: VEGF/VEGFR2 signaling regulates hippocampal axon branching during development. eLife 8, e49818 (2019)
31.
Journal Article
Bocker, H. T.; Heinrich, T.; Liebmann, L.; Hennings, J. C.; Seemann, E.; Gerth, M.; Jakovčevski, I.; Preobraschenski, J.; Kessels, M. M.; Westermann, M. et al.; Isbrandt, D.; Jahn, R.; Qualmann, B.; Hübner, C. A.: The Na+/H+ exchanger Nhe1 modulates network excitability via GABA release. Cerebral Cortex 29 (10), pp. 4263 - 4276 (2019)
32.
Journal Article
Kreutzberger, A. J. B.; Kiessling, V.; Stroupe, C.; Liang, B.; Preobraschenski, J.; Ganzella, M.; Kreutzberger, M. A. B.; Nakamoto, R.; Jahn, R.; Castle, J. D. et al.; Tamm, L. K.: In vitro fusion of single synaptic and dense core vesicles reproduces key physiological properties. Nature Communications 10, 3904 (2019)
33.
Journal Article
Yagensky, O.; Kohansal-Nodehi, M.; Gunaseelan, S.; Rabe, T.; Zafar, S.; Zerr, I.; Haertig, W.; Urlaub, H.; Chua, J.: Increased expression of heme-binding protein 1 early in Alzheimer's disease is linked to neurotoxicity. eLife 8, e47498 (2019)
34.
Journal Article
Koopmans, F.; van Nierop, P.; Andres-Alonso, M.; Byrnes, A.; Cijsouw, T.; Coba, M. P.; Cornelisse, L. N.; Farrell, R. J.; Goldschmidt, H. L.; Howrigan, D. P. et al.; Hussain, N. K.; Imig, C.; de Jong, A. P. H.; Jung, H.; Kohansalnodehi, M.; Kramarz, B.; Lipstein, N.; Lovering, R. C.; MacGillavry, H.; Mariano, V.; Mi, H.; Ninov, M.; Osumi-Sutherland, D.; Pielot, R.; Smalla, K. H.; Tang, H.; Tashman, K.; Toonen, R. F. G.; Verpelli, C.; Reig-Viader, R.; Watanabe, K.; van Weering, J.; Achsel, T.; Ashrafi, G.; Asi, N.; Brown, T. C.; De Camilli, P.; Feuermann, M.; Foulger, R. E.; Gaudet, P.; Joglekar, A.; Kanellopoulos, A.; Malenka, R.; Nicoll, R. A.; Pulido, C.; de Juan-Sanz, J.; Sheng, M.; Südhof, T. C.; Tilgner, H. U.; Bagni, C.; Bayés, A.; Biederer, T.; Brose, N.; Chua, J. J. E.; Dieterich, D. C.; Gundelfinger, E. D.; Hoogenraad, C.; Huganir, R. L.; Jahn, R.; Kaeser, P. S.; Kim, E.; Kreutz, M. R.; McPherson, P. S.; Neale, B. M.; O’Connor, V.; Posthuma, D.; Ryan, T. A.; Sala, C.; Feng, G.; Hyman, S. E.; Thomas, P. D.; Smit, A. B.; Verhage, M.: SynGO: An evidence-based, expert-curated knowledge base for the synapse. Neuron 103 (2), pp. 217 - 234 (2019)
35.
Journal Article
Saito, M.; Koike, S.; Holm, K.; Bregolin, F. L.; Hofsäss, H.: External RBS/PIXE analysis for evaluating quantum dots internalization into HeLa cells. Nuclear Instruments and Methods in Physics Research B 450, pp. 173 - 178 (2019)
36.
Journal Article
Raja, M. K.; Preobraschenski, J.; Del Olmo-Cabrera, S.; Martinez-Turrillas, R.; Jahn, R.; Perez-Otano, I.; Wesseling, J. F.: Elevated synaptic vesicle release probability in synaptophysin/gyrin family quadruple knockouts. eLife 8, e40744 (2019)
37.
Journal Article
Lakomek, N. A.; Yavuz, H.; Jahn, R.; Perez-Lara, A.: Structural dynamics and transient lipid binding of synaptobrevin-2 tune SNARE assembly and membrane fusion. Proceedings of the National Academy of Sciences of the United States of America 116 (18), pp. 8699 - 8708 (2019)
38.
Journal Article
Koike, S.; Jahn, R.: SNAREs define targeting specificity of trafficking vesicles by combinatorial interaction with tethering factors. Nature Communicationsvolume 10, 1608 (2019)
39.
Journal Article
Hubrich, R.; Park, Y.; Mey, I.; Jahn, R.; Steinem, C.: SNARE-mediated fusion of single chromaffin granules with pore-spanning membranes. Biophysical Journal 116 (2), pp. 308 - 318 (2019)
40.
Journal Article
Brose, N.; Brunger, A.; Cafiso, D.; Chapman, E. R.; Diao, J.; Hughson, F. M.; Jackson, M. B.; Jahn, R.; Lindau, M.; Ma, C. et al.; Rizo, J.; Shin, Y. K.; Söllner, T. H.; Tamm, L.; Yoon, T. Y.; Zhang, Y.: Synaptic vesicle fusion: Today and beyond. Nature Structural and Molecular Biology 26 (8), pp. 663 - 668 (2019)
41.
Journal Article
Hubrich, B.; Kumar, P.; Neitz, H.; Grunwald, M.; Grothe, T.; Walla, P. J.; Jahn, R.; Diederichsen, U.: PNA hybrid sequences as recognition units in SNARE-protein-mimicking peptides. Angewandte Chemie International Edition 57 (45), pp. 14932 - 14936 (2018)
42.
Journal Article
Oroz, J.; Chang, B. J.; Wysoczanski, P.; Lee, C. T.; Perez-Lara, A.; Chakraborty, P.; Hofele, R. V.; Baker, J. D.; Blair, L. J.; Biernat, J. et al.; Urlaub, H.; Mandelkow, E.; Dickey, C. A.; Zweckstetter, M.: Structure and pro-toxic mechanism of the human Hsp90/PPIase/Tau complex. Nature Communications 9, 4532 (2018)
43.
Journal Article
Bassereau, P.; Jin, R.; Baumgart, T.; Deserno, M.; Dimova, R.; Frolov, V. A.; Bashkirov, P. V.; Grubmüller, H.; Jahn, R.; Risselada, H. J. et al.; Johannes, L.; Kozlov, M. M.; Lipowsky, R.; Pucadyil, T. J.; Zeno, W. F.; Stachowiak, J. C.; Stamou, D.; Breuer, A.; Lauritsen, L.; Simon, C.; Sykes, C.; Voth, G. A.; Weikl, T. R.: The 2018 biomembrane curvature and remodeling roadmap. Journal of Physics D: Applied Physics 51 (34), 343001 (2018)
44.
Journal Article
Witkowska, A.; Jablonski, L.; Jahn, R.: A convenient protocol for generating giant unilamellar vesicles containing SNARE proteins using electroformation. Scientific Reports 8, 9422 (2018)
45.
Journal Article
Yavuz, H.; Kattan, I.; Hernandez, J. M.; Hofnagel, O.; Witkowska, A.; Raunser, S.; Walla, P. J.; Jahn, R.: Arrest of trans-SNARE zippering uncovers loosely and tightly docked intermediates in membrane fusion. Journal of Biological Chemistry 293 (22), pp. 8645 - 8655 (2018)
46.
Journal Article
Komorowski, K.; Salditt, A.; Xu, Y.; Yavuz, H.; Brennich, M.; Jahn, R.; Salditt, T.: Vesicle adhesion and fusion studied by small-angle x-ray scattering. Biophysical Journal 114 (8), pp. 1908 - 1920 (2018)
47.
Journal Article
Farsi, Z.; Gowrisankaran, S.; Krunic, M.; Rammner, B.; Woehler, A.; Lafer, E. M.; Mim, C.; Jahn, R.; Milosevic, I.: Clathrin coat controls synaptic vesicle acidification by blocking vacuolar ATPase activity. eLife 7, e32569 (2018)
48.
Journal Article
Preobraschenski, J.; Chere, C.; Ganzella, M.; Zander, J. F.; Richter, K.; Schenck, S.; Jahn, R.; Ahnert-Hilger, G.: Dual and direction-selective mechanisms of phosphate transport by the vesicular glutamate transporter. Cell Reports 23 (2), pp. 535 - 545 (2018)
49.
Journal Article
Xu, Y.; Kuhlmann, J.; Brennich, M.; Komorowski, K.; Jahn, R.; Steinem, C.; Salditt, T.: Reconstitution of SNARE proteins into solid-supported lipid bilayer stacks and X-ray structure analysis. Biochimica et Biophysica Acta (BBA) - Biomembranes 1860 (2), pp. 566 - 578 (2018)
50.
Journal Article
Bharat, V.; Siebrecht, M.; Burk, K.; Ahmed, S.; Reissner, C.; Kohansal-Nodehi, M.; Steubler, V.; Zweckstetter, M.; Ting, J. T.; Dean, C.: Capture of dense core vesicles at synapses by JNK-dependent phosphorylation of Synaptotagmin-4. Cell Reports 21 (8), pp. 2118 - 2133 (2017)
Go to Editor View