Max Planck Institute for Multidisciplinary Sciences

Publications

Journal Article (390)

1.

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Stief, T.; Gremer, L.; Pribicevic, S.; Espinueva, D. F.; Vormann, K.; Biehl, R.; Jahn, R.; Pérez-Lara, Á.; Lakomek, N.-A.: Intrinsic Disorder of the Neuronal SNARE Protein SNAP25a in its Pre-fusion Conformation. Journal of Molecular Biology 435 (10), 168069 (2023)

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Roig Adam, A.; Martínez-López, J.A.; van der Spek, S.J.F.; Achsel, T.; Andres-Alonso, M.; Bagni, C.; Bayés, À.; Biederer, T.; Brose, N.; Chua, J.J.E. et al.; Coba, M.P.; Cornelisse, L.N.; de Juan-Sanz, J.; Goldschmidt, H.L.; Gundelfinger, E.D.; Huganir, R.L.; Imig, C.; Jahn, R.; Jung, H.; Kaeser, P.S.; Kim, E.; Koopmans, F.; Kreutz, M.R.; Lipstein, N.; MacGillavry, H.D.; McPherson, P.S.; O’Connor, V.; Pielot, R.; Ryan, T.A.; Sala, C.; Sheng, M.; Smalla, K.-H.; Thomas, P.D.; Toonen, R.F.; van Weering, J.R.T.; Verpelli, C.; Sullivan, P.F.; Smit, A.B.; Verhage, M.; Hjerling-Leffler, J.: Transcriptional diversity in specific synaptic gene sets discriminates cortical neuronal identity. Biology Direct 18, 22 (2023)

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Kosmidis, E.; Shuttle, C. G.; Preobraschenski, J.; Ganzella, M.; Johnson, P. J.; Veshaguri, S.; Holmkvist, J.; Moller, M. P.; Marantos, O.; Marcoline, F. et al.; Grabe, M.; Pedersen, J. L.; Jahn, R.; Stamou, D.: Regulation of the mammalian-brain V-ATPase through ultraslow mode-switching. Nature 611 (7937), pp. 827 - 834 (2022)

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Weber, M.; von der Emde, H.; Leutenegger, M.; Gunkel, P.; Sambandan, S.; Khan, T. A.; Keller-Findeisen, J.; Cordes, V. C.; Hell, S. W.: MINSTED nanoscopy enters the Ångström localization range. Nature Biotechnology (2022)

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5.

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Birinci, Y.; Preobraschenski, J.; Ganzella, M.; Jahn, R.; Park, Y.: Author Correction: Isolation of large dense-core vesicles from bovine adrenal medulla for functional studies. Scientific Reports 12, 16738 (2022)

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Komorowski, K.; Preobraschenski, J.; Ganzella, M.; Alfken, J.; Neuhaus, C.; Jahn, R.; Salditt, T.: Neurotransmitter uptake of synaptic vesicles studied by X-ray diffraction. European Biophysics Journal 51, pp. 465 - 482 (2022)

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7.

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Upmanyu, N.; Jin, J.; von der Emde, H.; Ganzella, M.; Bösche, L.; Malviya, V. N.; Zhuleku, E.; Politi, A. Z.; Ninov, M.; Silbern, I. et al.; Leutenegger, M.; Urlaub, H.; Riedel, D.; Preobraschenski, J.; Milosevic, I.; Hell, S. W.; Jahn, R.; Sambandan, S.: Colocalization of different neurotransmitter transporters on synaptic vesicles is sparse except for VGLUT1 and ZnT3. Neuron 110 (9), pp. 1483 - 1497 (2022)

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8.

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Chang, H.-F.; Schirra, C.; Ninov, M.; Hahn, U.; Ravichandran, K.; Krause, E.; Becherer, U.; Bálint, Š.; Harkiolaki, M.; Urlaub, H. et al.; Valitutti, S.; Baldari, C. T.; Dustin, M. L.; Jahn, R.; Rettig, J.: Identification of distinct cytotoxic granules as the origin of supramolecular attack particles in T lymphocytes. Nature Communications 13, 1029 (2022)

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9.

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Koike, S.; Jahn, R.: SNARE proteins: zip codes in vesicle targeting? Biochemical Journal 479 (3), pp. 273 - 288 (2022)

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10.

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Mühlhausen, S.; Schmitt, H. D.; Plessmann, U.; Mienkus, P.; Sternisek, P.; Perl, T.; Weig, M.; Urlaub, H.; Bader, O.; Kollmar, M.: Proteogenomics analysis of CUG codon translation in the human pathogen Candida albicans. BMC Biology 19, 258 (2021)

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11.

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Binotti, B.; Jahn, R.; Pérez-Lara, A.: An overview of the synaptic vesicle lipid composition. Archives of Biochemistry and Biophysics 709, 108966 (2021)

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12.

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Chen, Y.; Vos, S. M.; Dienemann, C.; Ninov, M.; Urlaub, H.; Cramer, P.: Allosteric transcription stimulation by RNA polymerase II super elongation complex. Molecular Cell 81 (16), pp. 3386 - 3399.e10 (2021)

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Juranek, J. K.; Mukherjee, K.; Jahn, R.; Li, J.-Y.: Coordinated bi-directional trafficking of synaptic vesicle and active zone proteins in peripheral nerves. Biochemical and Biophysical Research Communications 559, pp. 92 - 98 (2021)

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14.

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Witkowska, A.; Heinz, L. P.; Grubmüller, H.; Jahn, R.: Tight docking of membranes before fusion represents a novel, metastable state with unique properties. Nature Communications 12, 3606 (2021)

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Kim, C.; Shon, M. J.; Kim, S. H.; Eun, G. S.; Ryu, J.-K.; Hyeon, C.; Jahn, R.; Yoon, T.-Y.: Extreme parsimony in ATP consumption by 20S complexes in the global disassembly of single SNARE complexes. Nature Communications 12, 3206 (2021)

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16.

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Grothe, T.; Nowak, J.; Jahn, R.; Walla, P. J.: Selected tools to visualize membrane interactions. European Biophysics Journal 50 (2), pp. 211 - 222 (2021)

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17.

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Wittig, S.; Ganzella, M.; Kostmann, S.; Barth, M.; Riedel, D.; Perez-Lara, A.; Jahn, R.; Schmidt, C.: Cross-linking mass spectrometry uncovers protein interactions and functional assemblies in synaptic vesicle membranes. Nature Communications 12, 858 (2021)

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18.

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Wu, X.; Ganzella, M.; Zhou, J.; Zhu, S.; Jahn, R.; Zhang, M.: Vesicle tethering on the surface of phase-separated active zone condensates. Molecular Cell 81 (1), pp. 13 - 24.e7 (2021)

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19.

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Silbern, I.; Pan, K. T.; Fiosins, M.; Bonn, S.; Rizzoli, S. O.; Fornasiero, E. F.; Urlaub, H.; Jahn, R.: Protein phosphorylation in depolarized synaptosomes: Dissecting primary effects of calcium from synaptic vesicle cycling. Molecular and Cellular Proteomics 20, 100061 (2021)

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20.

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Birinci, Y.; Preobraschenski, J.; Ganzella, M.; Jahn, R.; Park, Y.: Isolation of large dense-core vesicles from bovine adrenal medulla for functional studies. Scientific Reports 10, 7540 (2020)

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21.

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Luck, R.; Urban, S.; Karakatsani, A.; Harde, E.; Sambandan, S.; Nicholson, L.; Haverkamp, S.; Mann, R.; Martin-Villalba, A.; Schuman, E. M. et al.; Acker-Palmer, A.; de Almodovar, C. R.: VEGF/VEGFR2 signaling regulates hippocampal axon branching during development. eLife 8, e49818 (2019)

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22.

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Bocker, H. T.; Heinrich, T.; Liebmann, L.; Hennings, J. C.; Seemann, E.; Gerth, M.; Jakovčevski, I.; Preobraschenski, J.; Kessels, M. M.; Westermann, M. et al.; Isbrandt, D.; Jahn, R.; Qualmann, B.; Hübner, C. A.: The Na⁺/H⁺ exchanger Nhe1 modulates network excitability via GABA release. Cerebral Cortex 29 (10), pp. 4263 - 4276 (2019)

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23.

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Kreutzberger, A. J. B.; Kiessling, V.; Stroupe, C.; Liang, B.; Preobraschenski, J.; Ganzella, M.; Kreutzberger, M. A. B.; Nakamoto, R.; Jahn, R.; Castle, J. D. et al.; Tamm, L. K.: In vitro fusion of single synaptic and dense core vesicles reproduces key physiological properties. Nature Communications 10, 3904 (2019)

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24.

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Yagensky, O.; Kohansal-Nodehi, M.; Gunaseelan, S.; Rabe, T.; Zafar, S.; Zerr, I.; Haertig, W.; Urlaub, H.; Chua, J.: Increased expression of heme-binding protein 1 early in Alzheimer's disease is linked to neurotoxicity. eLife 8, e47498 (2019)

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25.

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Koopmans, F.; van Nierop, P.; Andres-Alonso, M.; Byrnes, A.; Cijsouw, T.; Coba, M. P.; Cornelisse, L. N.; Farrell, R. J.; Goldschmidt, H. L.; Howrigan, D. P. et al.; Hussain, N. K.; Imig, C.; de Jong, A. P. H.; Jung, H.; Kohansalnodehi, M.; Kramarz, B.; Lipstein, N.; Lovering, R. C.; MacGillavry, H.; Mariano, V.; Mi, H.; Ninov, M.; Osumi-Sutherland, D.; Pielot, R.; Smalla, K. H.; Tang, H.; Tashman, K.; Toonen, R. F. G.; Verpelli, C.; Reig-Viader, R.; Watanabe, K.; van Weering, J.; Achsel, T.; Ashrafi, G.; Asi, N.; Brown, T. C.; De Camilli, P.; Feuermann, M.; Foulger, R. E.; Gaudet, P.; Joglekar, A.; Kanellopoulos, A.; Malenka, R.; Nicoll, R. A.; Pulido, C.; de Juan-Sanz, J.; Sheng, M.; Südhof, T. C.; Tilgner, H. U.; Bagni, C.; Bayés, A.; Biederer, T.; Brose, N.; Chua, J. J. E.; Dieterich, D. C.; Gundelfinger, E. D.; Hoogenraad, C.; Huganir, R. L.; Jahn, R.; Kaeser, P. S.; Kim, E.; Kreutz, M. R.; McPherson, P. S.; Neale, B. M.; O’Connor, V.; Posthuma, D.; Ryan, T. A.; Sala, C.; Feng, G.; Hyman, S. E.; Thomas, P. D.; Smit, A. B.; Verhage, M.: SynGO: An evidence-based, expert-curated knowledge base for the synapse. Neuron 103 (2), pp. 217 - 234 (2019)

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26.

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Saito, M.; Koike, S.; Holm, K.; Bregolin, F. L.; Hofsäss, H.: External RBS/PIXE analysis for evaluating quantum dots internalization into HeLa cells. Nuclear Instruments and Methods in Physics Research B 450, pp. 173 - 178 (2019)

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27.

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Raja, M. K.; Preobraschenski, J.; Del Olmo-Cabrera, S.; Martinez-Turrillas, R.; Jahn, R.; Perez-Otano, I.; Wesseling, J. F.: Elevated synaptic vesicle release probability in synaptophysin/gyrin family quadruple knockouts. eLife 8, e40744 (2019)

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28.

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Lakomek, N. A.; Yavuz, H.; Jahn, R.; Perez-Lara, A.: Structural dynamics and transient lipid binding of synaptobrevin-2 tune SNARE assembly and membrane fusion. Proceedings of the National Academy of Sciences of the United States of America 116 (18), pp. 8699 - 8708 (2019)

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29.

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Koike, S.; Jahn, R.: SNAREs define targeting specificity of trafficking vesicles by combinatorial interaction with tethering factors. Nature Communicationsvolume 10, 1608 (2019)

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30.

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Hubrich, R.; Park, Y.; Mey, I.; Jahn, R.; Steinem, C.: SNARE-mediated fusion of single chromaffin granules with pore-spanning membranes. Biophysical Journal 116 (2), pp. 308 - 318 (2019)

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31.

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Brose, N.; Brunger, A.; Cafiso, D.; Chapman, E. R.; Diao, J.; Hughson, F. M.; Jackson, M. B.; Jahn, R.; Lindau, M.; Ma, C. et al.; Rizo, J.; Shin, Y. K.; Söllner, T. H.; Tamm, L.; Yoon, T. Y.; Zhang, Y.: Synaptic vesicle fusion: Today and beyond. Nature Structural and Molecular Biology 26 (8), pp. 663 - 668 (2019)

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32.

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Hubrich, B.; Kumar, P.; Neitz, H.; Grunwald, M.; Grothe, T.; Walla, P. J.; Jahn, R.; Diederichsen, U.: PNA hybrid sequences as recognition units in SNARE-protein-mimicking peptides. Angewandte Chemie International Edition 57 (45), pp. 14932 - 14936 (2018)

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33.

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Oroz, J.; Chang, B. J.; Wysoczanski, P.; Lee, C. T.; Perez-Lara, A.; Chakraborty, P.; Hofele, R. V.; Baker, J. D.; Blair, L. J.; Biernat, J. et al.; Urlaub, H.; Mandelkow, E.; Dickey, C. A.; Zweckstetter, M.: Structure and pro-toxic mechanism of the human Hsp90/PPIase/Tau complex. Nature Communications 9, 4532 (2018)

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34.

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Bassereau, P.; Jin, R.; Baumgart, T.; Deserno, M.; Dimova, R.; Frolov, V. A.; Bashkirov, P. V.; Grubmüller, H.; Jahn, R.; Risselada, H. J. et al.; Johannes, L.; Kozlov, M. M.; Lipowsky, R.; Pucadyil, T. J.; Zeno, W. F.; Stachowiak, J. C.; Stamou, D.; Breuer, A.; Lauritsen, L.; Simon, C.; Sykes, C.; Voth, G. A.; Weikl, T. R.: The 2018 biomembrane curvature and remodeling roadmap. Journal of Physics D: Applied Physics 51 (34), 343001 (2018)

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35.

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Witkowska, A.; Jablonski, L.; Jahn, R.: A convenient protocol for generating giant unilamellar vesicles containing SNARE proteins using electroformation. Scientific Reports 8, 9422 (2018)

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36.

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Yavuz, H.; Kattan, I.; Hernandez, J. M.; Hofnagel, O.; Witkowska, A.; Raunser, S.; Walla, P. J.; Jahn, R.: Arrest of trans-SNARE zippering uncovers loosely and tightly docked intermediates in membrane fusion. Journal of Biological Chemistry 293 (22), pp. 8645 - 8655 (2018)

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37.

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Komorowski, K.; Salditt, A.; Xu, Y.; Yavuz, H.; Brennich, M.; Jahn, R.; Salditt, T.: Vesicle adhesion and fusion studied by small-angle x-ray scattering. Biophysical Journal 114 (8), pp. 1908 - 1920 (2018)

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38.

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Farsi, Z.; Gowrisankaran, S.; Krunic, M.; Rammner, B.; Woehler, A.; Lafer, E. M.; Mim, C.; Jahn, R.; Milosevic, I.: Clathrin coat controls synaptic vesicle acidification by blocking vacuolar ATPase activity. eLife 7, e32569 (2018)

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39.

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Preobraschenski, J.; Chere, C.; Ganzella, M.; Zander, J. F.; Richter, K.; Schenck, S.; Jahn, R.; Ahnert-Hilger, G.: Dual and direction-selective mechanisms of phosphate transport by the vesicular glutamate transporter. Cell Reports 23 (2), pp. 535 - 545 (2018)

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40.

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Xu, Y.; Kuhlmann, J.; Brennich, M.; Komorowski, K.; Jahn, R.; Steinem, C.; Salditt, T.: Reconstitution of SNARE proteins into solid-supported lipid bilayer stacks and X-ray structure analysis. Biochimica et Biophysica Acta (BBA) - Biomembranes 1860 (2), pp. 566 - 578 (2018)

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41.

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Bharat, V.; Siebrecht, M.; Burk, K.; Ahmed, S.; Reissner, C.; Kohansal-Nodehi, M.; Steubler, V.; Zweckstetter, M.; Ting, J. T.; Dean, C.: Capture of dense core vesicles at synapses by JNK-dependent phosphorylation of Synaptotagmin-4. Cell Reports 21 (8), pp. 2118 - 2133 (2017)

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42.

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Lissek, T.; Adams, M.; Adelman, J.; Ahissar, E.; Akaaboune, M.; Akil, H.; al'Absi, M.; Arain, F.; Arango-Lasprilla, J. C.; Atasoy, D. et al.; Avila, J.; Badawi, A.; Bading, H.; Baig, A. M.; Baleriola, J.; Belmonte, C.; Bertocci, I.; Betz, H.; Blakemore, C.; Blanke, O.; Boehm-Sturm, P.; Bonheoffer, T.; Bonifazi, P.; Brose, N.; Campolongo, P.; Celikel, T.; Chang, C. C.; Chang, T. Y.; Citri, A.; Cline, H. T.; Cortes, J. M.; Cullen, K.; Dean, K.; Delgado-Garcia, J. M.; Desroches, M.; Disterhoft, J. M.; Dowling, J. E.; Draguhn, A.; El-Kamisky, S. F.; El Manira, A.; Enam, S. A.; Encinas, J. M.; Erramuzpe, A.; Esteban, J. A.; Farinas, I.; Fischer, E.; Fukunaga, I.; Gabilondo, I.; Ganten, D.; Gidon, A.; Gomez-Esteban, J. C.; Greengard, P.; Grinevich, V. ..; Gruart, A.; Gueillemin, R.; Hariri, A. R.; Hassan, B.; Häusser, M.; Hayashi, Y.; Hussain, N. K.; Jabbar, A. A.; Jaber, M.; Jahn, R.; Janahi, E. M.; Kabbaj, M.; Kettenmann, H.; Kindt, M.; Knafo, S.; Köhr, G.; Komai, S.; Krugers, H.; Kuhn, B.; Ghazal, N. L.; Larkum, M. E.; London, M.; Lutz, B.; Matute, C.; Martinez-Millan, L.; Maroun, M.; Mc Gaugh, J.; Moustafa, A. A.; Nasim, A.; Nave, K. A.; Neher, E.; Nikolich, K.; Outeiro, T.; Palmer, L. M.; Penagarikano, O.; Perez-Otano, I.; Pfaff, D. W.; Poucet, B.; Rahman, A. U.; Ramos-Cabrer, P.; Rashidy-Pour, A.; Roberts, R. J.; Rodrigues, S.; Sanes, J. R.; Schaefer, A. T.; Segal, M.; Segev, I.; Shafqat, S.; Siddiqui, N. A.; Soreq, H.; Soriano-Garcia, E.; Spanagel, R.; Sprengel, R.; Stuart, G.; Südhof, T. C.; Tønnesen, J.; Trevino, M.; Uthman, B. M.; Venter, J. C.; Verkhratsky, A.; Weiss, C.; Wiesel, T. N.; Yaksi, E.; Yizhar, O.; Young, L. J.; Young, P.; Zawia, N. H.; Zugaza, J. L.; Hasan, M. T.: Building Bridges through Science. Neuron 96 (4), pp. 730 - 735 (2017)

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43.

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Koike, S.; Jahn, R.: Probing and manipulating intracellular membrane traffic by microinjection of artificial vesicles. Proceedings of the National Academy of Sciences of the United States of America 114 (46), pp. E9883 - E9892 (2017)

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44.

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Lüningschrör, P.; Binotti, B.; Dombert, B.; Heimann, P.; Perez-Lara, A.; Slotta, C.; Thau-Habermann, N.; von Collenberg, C. R.; Karl, F.; Damme, M. et al.; Horowitz, A.; Maystadt, I.; Füchtbauer, A.; Füchtbauer, E. M.; Jablonka, S.; Blum, R.; Üçeyler, N.; Petri, S.; Kaltschmidt, B.; Jahn, R.; Kaltschmidt, C.; Sendtner, M.: Plekhg5-regulated autophagy of synaptic vesicles reveals a pathogenic mechanism in motoneuron disease. Nature Communications 8, 678 (2017)

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45.

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Scacioc, A.; Schmidt, C.; Hofmann, T.; Urlaub, H.; Kühnel, K.; Perez-Lara, A.: Structure based biophysical characterization of the PROPPIN Atg18 shows Atg18 oligomerization upon membrane binding. Scientific Reports 7, 14008 (2017)

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46.

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Kliesch, T. T.; Dietz, J.; Turco, L.; Halder, P.; Polo, E.; Tarantola, M.; Jahn, R.; Janshoff, A.: Membrane tension increases fusion efficiency of model membranes in the presence of SNAREs. Scientific Reports 7, 12070 (2017)

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47.

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Witkowska, A.; Jahn, R.: Rapid SNARE-mediated fusion of liposomes and chromaffin granules with giant unilamellar vesicles. Biophysical Journal 113 (6), pp. 1251 - 1259 (2017)

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48.

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Lanznaster, D.; Mack, J. M.; Coelho, V.; Ganzella, M.; Almeida, R. F.; Dal-Cim, T.; Hansel, G.; Zimmer, E. R.; Souza, D. O.; Prediger, R. D. et al.; Tasca, C. I.: Guanosine prevents anhedonic-like behavior and impairment in hippocampal glutamate transport following amyloid-β_1–40 administration in mice. Molecular Neurobiology 54 (7), pp. 5482 - 5496 (2017)

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Kreutzberger, A.J. B.; Kiessling, V.; Liang, B.; Seelheim, P.; Jakhanwal, S.; Jahn, R.; Castle, J. D.; Tamm, L. K.: Reconstitution of calcium-mediated exocytosis of dense-core vesicles. Science Advances 3 (7), e1603208 (2017)

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Jakhanwal, S.; Lee, C. T.; Urlaub, H.; Jahn, R.: An activated Q-SNARE/SM protein complex as a possible intermediate in SNARE assembly. EMBO Journal 36 (12), pp. 1788 - 1802 (2017)

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