Publications
Journal Article (22)
1.
Journal Article
13, 2139 (2022)
Analysis of sub-kilobase chromatin topology reveals nano-scale regulatory interactions with variable dependence on cohesin and CTCF. Nature Communications 2.
Journal Article
17 (2), pp. 445 - 475 (2022)
Capture-C: a modular and flexible approach for high-resolution chromosome conformation capture. Nature Protocols 3.
Journal Article
12, 4439 (2021)
Reactivation of a developmentally silenced embryonic globin gene. Nature Communications 4.
Journal Article
12, 3806 (2021)
A gain-of-function single nucleotide variant creates a new promoter which acts as an orientation-dependent enhancer-blocker. Nature Communications 5.
Journal Article
Defining genome architecture at base-pair resolution. Nature, In Press (2021)
6.
Journal Article
67, pp. 18 - 24 (2021)
The mouse alpha-globin cluster: A paradigm for studying genome regulation and organization. Current Opinion in Genetics and Development 7.
Journal Article
81 (5), pp. 983 - 997.e7 (2021)
Enhancers predominantly regulate gene expression during differentiation via transcription initiation. Molecular Cell 8.
Journal Article
12, 531(2021) (2021)
High-resolution targeted 3C interrogation of cis-regulatory element organization at genome-wide scale. Nature Communications 9.
Journal Article
The relationship between genome structure and function. Nature Reviews Genetics, In Press (2020)
10.
Journal Article
17 (11), pp. 1118 - 1124 (2020)
DeepC: predicting 3D genome folding using megabase-scale transfer learning. Nature Methods 11.
Journal Article
11, 2722 (2020)
Dynamics of the 4D genome during in vivo lineage specification and differentiation. Nature Communications 12.
Journal Article
30 (7), pp. 2125 - 2135.e1-e5 (2020)
A dynamic folded hairpin conformation is associated with α-globin activation in erythroid cells. Cell Reports 13.
Journal Article
10, 5412 (2019)
A revised model for promoter competition based on multi-way chromatin interactions at the α-globin locus. Nature Coummunications 14.
Journal Article
10, 2803 (2019)
DOT1L inhibition reveals a distinct subset of enhancers dependent on H3K79 methylation. Nature Communications 15.
Journal Article
50 (12), pp. 1744 - 1751 (2018)
Single-allele chromatin interactions identify regulatory hubs in dynamic compartmentalized domains. Nature Genetics 16.
Journal Article
9, 3849 (2018)
A tissue-specific self-interacting chromatin domain forms independently of enhancer-promoter interactions. Nature Communications 17.
Journal Article
45 (22), e184 (2017)
Robust detection of chromosomal interactions from small numbers of cells using low-input Capture-C. Nuceic Acids Research 18.
Journal Article
7 (23), e2645 (2017)
Low-input Capture-C: A chromosome conformation capture assay to analyze chromatin architecture in small numbers of cells. Bio-Protocol 19.
Journal Article
26 (R2), pp. R208 - R215 (2017)
Between form and function: The complexity of genome folding. Human Molecular Genetics 20.
Journal Article
19 (8), pp. 952 - 961 (2017)
Tissue-specific CTCF–cohesin-mediated chromatin architecture delimits enhancer interactions and function in vivo. Nature Cell Biology