Publications of Samir Karaca

Journal Article (10)

2024
Journal Article
Altas, B.; Rhee, H. J.; Ju, A.; Solis, H. C.; Karaca, S.; Winchenbach, J.; Kaplan-Arabaci, O.; Schwark, M.; Ambrozkiewicz, M.; Lee, C. et al.; Spieth, L.; Wieser, G. L.; Chaugule, V. K.; Majoul, I.; Hassan, M. A.; Goel, R.; Wojcik, S. M.; Koganezawa, N.; Hanamura, K.; Rotin, D.; Pichler, A.; Mitkovski, M.; de Hoz, L.; Poulopoulos, A.; Urlaub, H.; Jahn, O.; Saher, G.; Brose, N.; Rhee, J.; Kawabe, H.: Nedd4-2-dependent regulation of astrocytic Kir4.1 and Connexin43 controls neuronal network activity. Journal of Cell Biology 223 (1), e201902050 (2024)
2023
Journal Article
Alfaro, A. J.; Dittner, C.; Becker, J.; Loft, A.; Mhamane, A.; Maida, A.; Georgiadi, A.; Tsokanos, F.-F.; Klepac, K.; Molocea, C.-E. et al.; El-Merahbi, R.; Motzler, K.; Geppert, J.; Karikari, R. A.; Szendroedi, J.; Feuchtinger, A.; Hofmann, S.; Karaca, S.; Urlaub, H.; Berriel Diaz, M.; Melchior, F.; Herzig, S.: Fasting-sensitive SUMO-switch on Prox1 controls hepatic cholesterol metabolism. EMBO Reports 24 (10), e55981| (2023)
2021
Journal Article
Barysch, S. V.; Stankovic‐Valentin, N.; Miedema, K.-T.; Karaca, S.; Doppel, J.; Nait Achour, T.; Vasudeva, A.; Wolf, L.; Sticht, C.; Urlaub, H. et al.; Melchior, F.: Transient deSUMOylation of IRF2BP proteins controls early transcription in EGFR signaling. EMBO Reports 22 (3), e49651 (2021)
2018
Journal Article
Aksu, M.; Pleiner, T.; Karaca, S.; Kappert, C.; Dehne, H. J.; Seibel, K.; Urlaub, H.; Bohnsack, M. T.; Görlich, D.: Xpo7 is a broad-spectrum exportin and a nuclear import receptor. Journal of Cell Biology 217 (7), pp. 2329 - 2340 (2018)
2016
Journal Article
Narayanan, P.; Sondermann, J.; Rouwette, T.; Karaca, S.; Urlaub, H.; Mitkovski, M.; Gomez-Varela, D.; Schmidt, M.: Native Piezo2 interactomics identifies pericentrin as a novel regulator of Piezo2 in somatosensory neurons. Journal of Proteome Research 15 (8), pp. 2676 - 2687 (2016)
Journal Article
Cicek, I. Ö.; Karaca, S.; Brankatschk, M.; Eaton, S.; Urlaub, H.; Shcherbata, H. R.: Hedgehog signaling strength is orchestrated by the mir-310 cluster of microRNAs in response to diet. Genetics 202 (3), pp. 1167 - 1183 (2016)
2015
Journal Article
Kirli, K.; Karaca, S.; Dehne, H. J.; Samwer, M.; Pan, K. T.; Lenz, C.; Urlaub, H.; Görlich, D.: A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning. eLife 4, e11466 (2015)
2013
Journal Article
Wirth, M.; Karaca, S.; Wenzel, D.; Ho, L.; Tishkoff, D.; Lombard, D. B.; Verdin, E.; Urlaub, H.; Jedrusik-Bode, M.; Fischle, W.: Mitochondrial SIRT4-type proteins in Caenorhabditis elegans and mammals interact with pyruvate carboxylase and other acetylated biotin-dependent carboxylases. Mitochondrion 13 (6), pp. 705 - 720 (2013)
Journal Article
Becker , J.; Barysch, S. V.; Karaca, S.; Dittmer, C.; Hsiao, H. H.; Diaz , M. B.; Herzig, S.; Urlaub, H.; Melchior, F.: Detecting endogenous SUMO targets in mammalian cells and tissues. Nature Structural and Molecular Biology 20 (4), pp. 525 - 531 (2013)
Journal Article
Thakar, K.; Karaca, S.; Port, S. A.; Urlaub, H.; Kehlenbach, R. H.: Identification of CRM1-dependent nuclear export cargos using quantitative mass spectrometry. Molecular and Cellular Proteomics 12, pp. 664 - 678 (2013)

Book Chapter (1)

2014
Book Chapter
Kimura, M.; Thakar, K.; Karaca, S.; Imamoto, N.; Kehelenbach, R. H.: Novel approaches for the identification of nuclear transport receptor substrates. In: Nuclear pore complexes and nucleocytoplasmic transport - Methods, pp. 353 - 378 (Ed. Doye, V.). Amsterdam, Elsevier (2014)

Conference Paper (1)

2014
Conference Paper
Kirli, K.; Karaca, S.; Urlaub, H.; Görlich, D.: Exploring the complete spectrum of CRM1 cargoes. ASCB/IFCB Meeting, Philadelphia, PA, December 06, 2014 - December 10, 2014. Molecular Biology of the Cell 25, p. E57 - E57 (2014)

Thesis - PhD (1)

2014
Thesis - PhD
Karaca, S.: MS-based quantitative analysis of the CRM1 export pathway and spatial proteomics of the Xenopus laevis oocyte. Dissertation, Georg-August-Universität, Göttingen (2014)

Preprint (1)

2019
Preprint
Altas, B.; Ju, A.; Cruces Solís, H.; Karaca, S.; Winchenbach, J.; Kaplan, Ö.; Schwark, M.; Wieser, G. L.; Chaugule, V. K.; Majoul, I. et al.; Hassan, M. A.; Goel, R.; Wojcik, S. M.; Pichler, A.; Mitkovski, M.; de Hoz, L.; Urlaub, H.; Jahn, O.; Saher, G.; Rhee, J. S.; Kawabe, H.: Physiological and pathophysiological homeostasis of astroglial channel proteins by Nedd4-2. (2019)
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