Publications of B. Hammesfahr

Kollmar, M.; Kollmar, L.; Hammesfahr, B.; Simm, D.: diArk - the database for eukaryotic genome and transcriptome assemblies in 2014. Nucleic Acids Research 43 (D1), pp. D1107 - D1112 (2015)

Mazur, A.; Hammesfahr, B.; Griesinger, C.; Lee, D.; Kollmar, M.: ShereKhan—calculating exchange parameters in relaxation dispersion data from CPMG experiments. Bioinformatics 29 (14), pp. 1819 - 1820 (2013)

Hatje, K.; Hammesfahr, B.; Kollmar, M.: WebScipio: Reconstructing alternative splice variants of eukaryotic proteins. Nucleic Acids Research 41 (W1), pp. W504 - W509 (2013)

Schneider, R.; Odronitz, F.; Hammesfahr, B.; Hellkamp, M.; Kollmar, M.: Peakr: Simulating solid-state NMR spectra of proteins. Bioinformatics 29 (9), pp. 1134 - 1140 (2013)

Hammesfahr, B.; Odronitz, F.; Mühlhausen, S.; Waack, S.; Kollmar, M.: GenePainter: A fast tool for aligning gene structures of eukaryotic protein families, visualizing the alignments and mapping gene structures onto protein structures. BMC Bioinformatics 14, 77 (2013)

Hammesfahr, B.; Kollmar, M.: Evolution of the eukaryotic dynactin complex, the activator of cytoplasmic dynein. BMC Evolutionary Biology 12, 95 (2012)

Eckert, C.; Hammesfahr, B.; Kollmar, M.: A holistic phylogeny of the coronin gene family reveals an ancient origin of the tandem-coronin, defines a new subfamily, and predicts protein function. BMC Evolutionary Biology 11, 268 (2011)

Hammesfahr, B.; Odronitz, F.; Hellkamp, M.; Kollmar, M.: diArk 2.0 provides detailed analyses of the ever increasing eukaryotic genome sequencing data. BMC Research Notes 4, 338 (2011)

Pillmann, H.; Hatje, K.; Odronitz, F.; Hammesfahr, B.; Kollmar, M.: Predicting mutually exclusive spliced exons based on exon length, splice site and reading frame conservation, and exon sequence homology. BMC Bioinformatics 12, 270 (2011)

Hatje, K.; Keller, O.; Hammesfahr, B.; Pillmann, H.; Waack, S.; Kollmar, M.: Cross-species protein sequence and gene structure prediction with fine-tuned Webscipio 2.0 and Scipio. BMC Research Notes 4 (1), 265 (2011)

Hammesfahr, B.: Genomics and phylogeny of cytoskeletal proteins: Tools and analyses. Dissertation, 222 pp., Georg-August-Universität, Göttingen (2012)