Publications of S. Donnini

Dobrev, P.; Donnini, S.; Groenhof, G.; Grubmüller, H.: Accurate three states model for amino acids with two chemically coupled titrating sites in explicit solvent atomistic constant pH simulations and pK_a calculations. Journal of Chemical Theory and Computation 13 (1), pp. 147 - 160 (2017)

Bennett, W. F. D.; Chen, A. W.; Donnini, S.; Groenhof, G.; Tieleman, D. P.: Constant pH simulations with the coarse-grained MARTINI model—Application to oleic acid aggregates. Canadian Journal of Chemistry 91 (9), pp. 839 - 846 (2013)

Donnini, S.; Villa, A.; Groenhof, G.; Mark, A. E.; Wierenga, R. K.; Juffer, A. H.: Inclusion of ionization states of ligands in affinity calculations. Proteins: Structure, Function, and Bioinformatics 76 (1), pp. 138 - 150 (2009)

Donnini, S.; Groenhof, G.; Wierenga, R. K.; Juffer, A. H.: The planar conformation of a strained proline ring: A QM/MM study. Proteins 64 (3), pp. 700 - 710 (2006)

Bennett, W. F. D.; Donnini, S.; Groenhof, G.; Tielemann, D. P.: Fatty acid aggregates simulated using constant pH molecular dynamics with a coarse-grained model. 57th Annual Meeting of the Biophysical-Society , Philadelphia/PA, February 02, 2013 - February 06, 2013. Biophysical Journal 104 (Supplement 1), 2 Ed., p. 169A - 169A (2013)