Publications of Milot Mirdita
All genres
Journal Article (13)
2024
Journal Article
42, pp. 243 - 246 (2024)
Fast and accurate protein structure search with Foldseek. Nature Biotechnology 2022
Journal Article
19 (6), pp. 679 - 682 (2022)
ColabFold: making protein folding accessible to all. Nature Methods 2021
Journal Article
37 (19), pp. 3364 - 3366 (2021)
SpacePHARER: sensitive identification of phages from CRISPR spacers in prokaryotic hosts. Bioinformatics
Journal Article
37 (18), pp. 3029 - 3031 (2021)
Fast and sensitive taxonomic assignment to metagenomic contigs. Bioinformatics
Journal Article
368 (12), fnab067 (2021)
Going to extremes: A metagenomic journey into the dark matter of life. FEMS Microbiology Letters
Journal Article
49 (D1), pp. D298 - D308 (2021)
DescribePROT: database of amino acid-level protein structure and function predictions. Nucleic Acids Research 2020
Journal Article
72 (1), e108 (2020)
Protein sequence analysis using the MPI Bioinformatics Toolkit. Current Protocols in Bioinformatics
Journal Article
8, 48 (2020)
MetaEuk—sensitive, high-throughput gene discovery, and annotation for large-scale eukaryotic metagenomics. Microbiome 2019
Journal Article
20 (1), 473 (2019)
HH-suite3 for fast remote homology detection and deep protein annotation. BMC Bioinformatics
Journal Article
35 (16), pp. 2856 - 2858 (2019)
MMseqs2 desktop and local web server app for fast, interactive sequence searches. Bioinformatics
Journal Article
16, pp. 603 - 606 (2019)
Protein-level assembly increases protein sequence recovery from metagenomic samples manyfold. Nature Methods 2018
Journal Article
8, 9938 (2018)
An analysis and evaluation of the WeFold collaborative for protein structure prediction and its pipelines in CASP11 and CASP12. Scientific Reports 2017
Journal Article
45 (D1), pp. D170 - D176 (2017)
Uniclust databases of clustered and deeply annotated protein sequences and alignments. Nucleic Acids Research Thesis - Master (1)
2016
Thesis - Master
Uniclust databases of clustered and deeply annotated protein sequences and aligments. Master, Computer Science, Technische Universität, München (2016)