Publications of Klas Hatje

Kollmar, M.; Welz, T.; Ravi, A.; Kaufmann, T.; Alzahofi, N.; Hatje, K.; Alghamdi, A.; Kim, J.; Briggs, D. A.; Samol-Wolf, A. et al.; Pylypenko, O.; Hume, A. N.; Burkhardt, P.; Faix, J.; Kerkhoff, E.: Actomyosin organelle functions of SPIRE actin nucleators precede animal evolution. Communications Biology 7, 832 (2024)

Pearce, S. L.; Clarke, D. F.; East, P. D.; Elfekih, S.; Gordon, K. H. J.; Jermiin, L. S.; McGaughran, A.; Oakeshott, J. G.; Papanicolaou, A.; Perera, O. P. et al.; Rane, R. V.; Richards, S.; Tay, W. T.; Walsh, T. K.; Anderson, A.; Anderson, C. J.; Asgari, S.; Board, P. G.; Bretschneider, A.; Campbell, P. M.; Chertemps, T.; Christeller, J. T.; Coppin, C. W.; Downes, S. J.; Duan, G.; Farnsworth, C. A.; Good, R. T.; Han, L. B.; Han, Y. C.; Hatje, K.; Horne, I.; Huang, Y. P.; Hughes, D. S. T.; Jacquin-Joly, E.; James, W.; Jhangiani, S.; Kollmar, M.; Kuwar, S. S.; Li, S.; Liu, N. Y.; Maibeche, M. T.; Miller, J. R.; Montagne, N.; Perry, T.; Qu, J.; Song, S. V.; Sutton, G. G.; Vogel, H.; Walenz, B. P.; Xu, W.; Zhang, H. J.; Zou, Z.; Batterham, P.; Edwards, O. R.; Feyereisen, R.; Gibbs, R. A.; Heckel, D. G.; McGrath, A.; Robin, C.; Scherer, S. E.; Worley, K. C.; Wu, Y. D.: Genomic innovations, transcriptional plasticity and gene loss underlying the evolution and divergence of two highly polyphagous and invasive Helicoverpa pest species. BMC Biology 15, 63 (2017)

Simm, D.; Hatje, K.; Kollmar, M.: Waggawagga: Comparative visualization of coiled-coil predictions and detection of stable single α-helices (SAH domains). Bioinformatics 31 (5), pp. 767 - 769 (2015)

Horwege, S.; Lindner, S.; Boden, M.; Hatje, K.; Kollmar, M.; Leimeister, C. A.; Morgenstern, B.: Spaced words and kmacs: Fast alignment-free sequence comparison based on inexact word matches. Nucleic Acids Research 42 (W1), pp. W7 - W11 (2014)

Hatje, K.; Kollmar, M.: Kassiopeia: A database and web application for the analysis of mutually exclusive exomes of eukaryotes. BMC Genomics 15, 115 (2014)

Kollmar, M.; Hatje, K.: Shared gene structures and clusters of mutually exclusive spliced exons within the metazoan muscle myosin heavy chain genes. PLoS One 9 (2), e88111 (2014)

Hatje, K.; Kollmar, M.: Expansion of the mutually exclusive spliced exome in Drosophila. Nature Communications 4, 2460 (2013)

Hatje, K.; Hammesfahr, B.; Kollmar, M.: WebScipio: Reconstructing alternative splice variants of eukaryotic proteins. Nucleic Acids Research 41 (W1), pp. W504 - W509 (2013)

Hatje, K.; Kollmar, M.: A phylogenetic analysis of the Brassicales clade based on an alignment-free sequence comparison method. Frontiers in Plant Science 3, 192 (2012)

Pillmann, H.; Hatje, K.; Odronitz, F.; Hammesfahr, B.; Kollmar, M.: Predicting mutually exclusive spliced exons based on exon length, splice site and reading frame conservation, and exon sequence homology. BMC Bioinformatics 12, 270 (2011)

Hatje, K.; Keller, O.; Hammesfahr, B.; Pillmann, H.; Waack, S.; Kollmar, M.: Cross-species protein sequence and gene structure prediction with fine-tuned Webscipio 2.0 and Scipio. BMC Research Notes 4 (1), 265 (2011)

Hatje, K.; Kollmar, M.: Predicting tandemly arrayed gene duplicates with WebScipio. In: Gene duplication, pp. 59 - 76 (Ed. Friedberg, F.). InTech, Rijeka/Kroatien (2011)

Hatje, K.: Genome-wide analysis of mutually exclusive splicing. Dissertation, Georg-August-Universität, Göttingen (2013)