Publications of J. C. Rink

Stückemann, T.; Cleland, J. P.; Werner, S.; Vu, H. T. K.; Bayersdorf, R.; Liu, S. Y.; Friedrich, B.; Jülicher, F.; Rink, J. C.: Antagonistic self-organizing patterning systems control maintenance and regeneration of the anteroposterior axis in planarians. Developmental Cell 40 (3), pp. 248 - 263.e4 (2017)

Werner, S.; Vu, H. T. K.; Rink, J. C.: Self-organization in development, regeneration and organoids. Current Opinion in Cell Biology 44, pp. 102 - 109 (2017)

Hoffmann, K. B.; Voss-Böhme, A.; Rink, J. C.; Brusch, L.: A dynamically diluted alignment model reveals the impact of cell turnover on the plasticity of tissue polarity patterns. Journal of the Royal Society Interface 14 (135), 20170466 (2017)

Levin, M.; Anavy, L.; Cole, A. G.; Winter, E.; Mostov, N.; Khair, S.; Senderovich, N.; Kovalev, E.; Silver, D. H.; Feder, M. et al.; Fernandez-Valverde, S. L.; Nakanishi, N.; Simmons, D.; Simakov, O.; Larsson, T.; Liu, S. Y.; Jerafi-Vider, A.; Yaniv, K.; Ryan, J. F.; Martindale, M. Q.; Rink, J. C.; Arendt, D.; Degnan, S. M.; Degnan, B. M.; Hashimshony, T.; Yanai, I.: The mid-developmental transition and the evolution of animal body plans. Nature 531 (7596), pp. 637 - 641 (2016)

Brandl, H.; Moon, H.; Vila Farre, M.; Liu, S. Y.; Henry, I.; Rink, J. C.: PlanMine - A mineable resource of planarian biology and biodiversity. Nucleic Acids Research 44 (D1), pp. D764 - D773 (2016)

Vu, H. T. K.; Rink, J. C.; McKinney, S. A.; McClain, M.; Lakshmanaperumal, N.; Alexander, R.; Alvarado, A. S.: Stem cells and fluid flow drive cyst formation in an invertebrate excretory organ. eLife 4, e07405 (2015)

Werner, S.; Stückemann, T.; Amigo, M. B.; Rink, J. C.; Jülicher, F.; Friedrich, B. M.: Scaling and regeneration of self-organized patterns. Physical Review Letters 114 (13), 138101 (2015)

Werner, S.; Rink, J. C.; Riedel-Kruse, I. H.; Friedrich, B. M.: Shape mode analysis exposes movement patterns in biology: Flagella and flatworms as case studies. PLoS One 9 (11), e113083 (2014)

Liu, S. Y.; Selck, C.; Friedrich, B.; Lutz, R.; Vila Farré, M.; Dahl, A.; Brandl, H.; Lakshmanaperumal, N.; Henry, I.; Rink, J. C.: Reactivating head regrowth in a regeneration-deficient planarian species. Nature 500 (7460), pp. 81 - 84 (2013)

Rink, J. C.: Stem cell systems and regeneration in planaria. Development Genes and Evolution 223 (1-2), pp. 67 - 84 (2013)

Vij, S.; Rink, J. C.; Ho, H. K.; Babu, D.; Eitel, M.; Narasimhan, V.; Tiku, V.; Westbrook, J.; Schierwater, B.; Roy, S.: Evolutionarily ancient association of the FoxJ1 transcription factor with the motile ciliogenic program. PLoS Genetics 8 (11), e1003019 (2012)

Rink, J. C.; Vu, H. T. K.; Alvarado, A. S.: The maintenance and regeneration of the planarian excretory system are regulated by EGFR signaling. Development 138 (17), pp. 3769 - 3780 (2011)

Collinet, C.; Stöter, M.; Bradshaw, C. R.; Samusik, N.; Rink, J. C.; Kenski, D.; Habermann, B.; Buchholz, F.; Henschel, R.; Mueller, M. S. et al.; Nagel, W. E.; Fava, E.; Kalaidzidis, Y.; Zerial, M.: Systems survey of endocytosis by multiparametric image analysis. Nature 464 (7286), pp. 243 - 249 (2010)

Pearson, B. J.; Eisenhoffer, G. T.; Gurley, K. A.; Rink, J. C.; Miller, D. E.; Alvarado, A. S.: Formaldehyde-based whole-mount in situ hybridization method for planarians. Developmental Dynamics 238 (2), pp. 443 - 450 (2009)

Rink, J. C.; Gurley, K. A.; Elliott, S. A.; Alvarado, A. S.: Planarian Hh signaling regulates regeneration polarity and links Hh pathway evolution to cilia. Science 326 (5958), pp. 1406 - 1410 (2009)

Gurley, K. A.; Rink, J. C.; Alvarado, A. S.: Beta-catenin defines head versus tail identity during planarian regeneration and homeostasis. Science 319 (5861), pp. 323 - 327 (2008)

Del Conte-Zerial, P.; Brusch, L.; Rink, J. C.; Collinet, C.; Kalaidzidis, Y.; Zerial, M.; Deutsch, A.: Membrane identity and GTPase cascades regulated by toggle and cut-out switches. Molecular Systems Biology 4 (1), 206 (2008)

Rink, J. C.; Ghigo, E.; Kalaidzidis, Y.; Zerial, M.: Rab conversion as a mechanism of progression from early to late endosomes. Cell 122 (5), pp. 735 - 749 (2005)

Johannes, E.; Collings, D. A.; Rink, J. C.; Strömgren Allen, N.: Cytoplasmic pH dynamics in maize pulvinal cells induced induced by gravity vector changes. Plant Physiology 127 (1), pp. 119 - 130 (2001)

Collings, D. A.; Carter, C. N.; Rink, J. C.; Scott, A. C.; Wyatt, S. E.; Strömgren Allen, N.: Plant nuclei can contain extensive grooves and invaginations. The Plant Cell 12 (12), pp. 2425 - 2439 (2000)