Publications of J. Liepe
All genres
Journal Article (39)
21.
Journal Article
7, 43718 (2017)
Extracellular proteasome-osteopontin circuit regulates cell migration with implications in multiple sclerosis. Scientific Reports 22.
Journal Article
354 (6310), pp. 354 - 358 (2016)
A large fraction of HLA class I ligands are proteasome-generated spliced peptides. Science 23.
Journal Article
26 (15), pp. 1975 - 1989 (2016)
Systems analysis of the dynamic inflammatory response to tissue damage reveals spatiotemporal properties of the wound attractant gradient. Current Biology 24.
Journal Article
3 (1), pp. 102 - 107 (2016)
Accurate reconstruction of cell and particle tracks from 3D live imaging data. Cell Systems 25.
Journal Article
46 (5), pp. 1109 - 1118 (2016)
CD8(+) T cells of Listeria monocytogenes-infected mice recognize both linear and spliced proteasome products. European Journal of Immunology 26.
Journal Article
290 (51), pp. 30417 - 30428 (2015)
The T210M substitution in the HLA-a*02:01 gp100 epitope strongly affects overall proteasomal cleavage site usage and antigen processing. Journal of Biological Chemistry 27.
Journal Article
12 (6), 066001 (2015)
Inference of random walk models to describe leukocyte migration. Physical Biology 28.
Journal Article
4, e07545 (2015)
Quantitative time-resolved analysis reveals intricate, differential regulation of standard- and immuno-proteasomes. eLife 29.
Journal Article
91 (4), 042115 (2015)
Goldstein-Kac telegraph processes with random speeds: Path probabilities, likelihoods, and reported Lévy flights. Physical Review E 30.
Journal Article
44 (12), pp. 3508 - 3521 (2014)
Proteasome isoforms exhibit only quantitative differences in cleavage and epitope generation. European Journal of Immunology 31.
Journal Article
35, pp. 98 - 108 (2014)
Information theory and signal transduction systems: From molecular information processing to network inference. Seminars in Cell and Developmental Biology 32.
Journal Article
4 (2), pp. 585 - 599 (2014)
Modelling proteasome and proteasome regulator activities. Biomolecules 33.
Journal Article
9, pp. 439 - 456 (2014)
A framework for parameter estimation and model selection from experimental data in systems biology using approximate Bayesian computation. Nature Protocols 34.
Journal Article
9 (1), e1002888 (2013)
Maximizing the information content of experiments in systems biology. PLoS Computational Biology 35.
Journal Article
91 (1), pp. 60 - 69 (2013)
P38 and JNK have opposing effects on persistence of in vivo leukocyte migration in zebrafish. Immunology and Cell Biology 36.
Journal Article
4 (3), pp. 335 - 345 (2012)
Calibrating spatio-temporal models of leukocyte dynamics against in vivo live-imaging data using approximate Bayesian computation. Integrative Biology 37.
Journal Article
27 (6), pp. 874 - 876 (2011)
GPU accelerated biochemical network simulation. Bioinformatics 38.
Journal Article
26 (14), pp. 1797 - 1799 (2010)
ABC-SysBio-approximate Bayesian computation in Python with GPU support. Bioinformatics 39.
Journal Article
6 (6), e1000830 (2010)
The 20S proteasome splicing activity discovered by SpliceMet. PLoS Computational Biology Book Chapter (1)
40.
Book Chapter
ABC in systems biology. In: Handbook of approximate bayesian computation (Eds. Sisson, S. A.; Fan, Y.; Beaumont, M. A.) (2019)