Publications of B. de Groot
All genres
Conference Paper (37)
201.
Conference Paper
27 (Suppl_1), pp. 158 - 159 (2018)
Incorporating hierarchical kinetics into determination of protein structure. 32nd Annual Symposium of the Protein-Society, Boston, MA, July 09, 2018 - July 12, 2018. Protein Science 202.
Conference Paper
ATP as a fuel molecule: Evolutionary selection of magnesium-ATP interaction mode facilitates lossless chemomechanical coupling for ATPases. 62nd Annual Meeting of the Biophysical-Society, San Francisco, CA, February 17, 2018 - February 21, 2018. Biophysical Journal (Suppl), 3 Ed., p. 680a - 680a (2018)
203.
Conference Paper
46 (Suppl_1), p. S65 - S65 (2017)
Structural ensembles of intrinsically disordered proteins using all-atom molecular simulation. 19th IUPAB Congress / 11th EBSA Congress, Edinburgh, Scotland, July 16, 2017 - July 20, 2017. European Biophysics Journal 204.
Conference Paper
112 (Suppl 1), 3 Ed., pp. 175a - 176a (2017)
CHARMM36: An improved force field for folded and intrinsically disordered proteins. 61st Annual Meeting of the Biophysical-Society, New Orleans, LA, February 11, 2017 - February 15, 2017. Biophysical Journal 205.
Conference Paper
112 (Suppl 1), 3 Ed., p. 163a - 163a (2017)
Molecular simulations of ion permeation in potassium channels. 61st Annual Meeting of the Biophysical-Society, New Orleans, LA, February 11, 2017 - February 15, 2017. Biophysical Journal 206.
Conference Paper
112 (Suppl 1), 3 Ed., p. 139a - 139a (2017)
Ions in action - Studying ion channels by computational electrophysiology in GROMACS. 61st Annual Meeting of the Biophysical-Society, New Orleans, LA, February 11, 2017 - February 15, 2017. Biophysical Journal 207.
Conference Paper
110 (Suppl 1), 3 Ed., p. 91A - 91A (2016)
Mechanosensetivity and symmetry in K2P channels. 60th Annual Meeting of the Biophysical-Society, Los Angeles, CA, February 27, 2016 - March 02, 2016. Biophysical Journal 208.
Conference Paper
110 (Suppl 1), 3 Ed., p. 9A - 9A (2016)
The molecular dynamics of ion channel permeation, selectivity and gating. 60th Annual Meeting of the Biophysical-Society, Los Angeles, CA, February 27, 2016 - March 02, 2016. Biophysical Journal 209.
Conference Paper
110 (Suppl 1), 3 Ed., p. 368A - 368A (2016)
Insights from the first Principles based large scale protein thermostability calculations. 60th Annual Meeting of the Biophysical-Society, Los Angeles, CA, February 27, 2016 - March 02, 2016. Biophysical Journal 210.
Conference Paper
110 (Suppl 1), 3 Ed., p. 106A - 106A (2016)
Gating charge calculations: Probing voltage-sensing proteins through computational electrophysiology. 60th Annual Meeting of the Biophysical-Society, Los Angeles, CA, February 27, 2016 - March 02, 2016. Biophysical Journal 211.
Conference Paper
110 (Suppl 1), 3 Ed., p. 358A - 358A (2016)
Structural ensembles of intrinsically disordered proteins depend strongly on force field: A comparison to experiment. 60th Annual Meeting of the Biophysical-Society, Los Angeles, CA, February 27, 2016 - March 02, 2016. Biophysical Journal 212.
Conference Paper
110 (Suppl 1), 3 Ed., p. 277A - 277A (2016)
A non-canonical voltage sensor controls gating in K2P K+ channels. 60th Annual Meeting of the Biophysical-Society, Los Angeles, CA, February 27, 2016 - March 02, 2016. Biophysical Journal 213.
Conference Paper
110 (Suppl_1), 3 Ed., p. 221A - 221A (2016)
Allostery through protein motion at different length and time scales. 60th Annual Meeting of the Biophysical-Society, Los Angeles, CA, February 27, 2016 - March 02, 2016. Biophysical Journal 214.
Conference Paper
63 (Supplement 1), p. E446 - E446 (2015)
Gating of aquaporin 4-phosphorylation versus protonation. 12th European Meeting on Glial Cell Function in Health and Disease, Bilbao/Spain, July 15, 2015 - July 18, 2015. Glia 215.
Conference Paper
108 (Suppl. 1), p. 316a - 316a (2015)
His 95 acts as a pH gate in Aquaporin-4. Biophysical Journal 216.
Conference Paper
106 (Suppl. 1), 2 Ed., pp. 262a - 263a (2014)
Computational thrombin inhibitor optimization. 58th Annual Meeting of the Biophysical-Society, San Francisco, CA, February 15, 2014 - February 19, 2014. Biophysical Journal 217.
Conference Paper
196 (Suppl. 1), p. 663a - 663a (2014)
Solute permeation in aquaporin channels. 58th Annual Meeting of the Biophysical-Society , San Francisco, CA, February 15, 2014 - February 19, 2014. Biophysical Journal 218.
Conference Paper
106 (2, Suppl. 1), p. 539a - 539a (2014)
Ion permeation efficiency through potassium channels. 58th Annual Meeting of the Biophysical-Society, San Francisco, CA, February 15, 2014 - February 19, 2014. Biophysical Journal 219.
Conference Paper
106 (2, Suppl. 1), p. 271a (2014)
Structural ensembles of intrinsically disordered proteins depend strongly on force field. 58th Annual Meeting of the Biophysical-Society, San Francisco, CA, February 15, 2014 - February 19, 2014. Biophysical Journal 220.
Conference Paper
61 (Supplement 1), p. S205 - S205 (2013)
Phosphorylation of aquaporin-4 at Ser111 is not required for channel gating. 11th European Meeting on Glial Cell Function in Health and Disease, Berlin/Germany, July 03, 2013 - July 06, 2013. Glia