Publikationen von J. Söding
Alle Typen
Zeitschriftenartikel (110)
21.
Zeitschriftenartikel
16, S. 603 - 606 (2019)
Protein-level assembly increases protein sequence recovery from metagenomic samples manyfold. Nature Methods 22.
Zeitschriftenartikel
8, e47040 (2019)
Transcriptome maps of general eukaryotic RNA degradation factors. eLife 23.
Zeitschriftenartikel
14 (12), e1007856 (2018)
Bayesian multiple logistic regression for case-control GWAS. PLoS Genetics 24.
Zeitschriftenartikel
14 (11), e1006526 (2018)
Synthetic protein alignments by CCMgen quantify noise in residue-residue contact prediction. PLoS Computational Biology 25.
Zeitschriftenartikel
430 (15), S. 2237 - 2243 (2018)
A completely reimplemented MPI Bioinformatics Toolkit with a new HHpred server at its core. Journal of Molecular Biology 26.
Zeitschriftenartikel
8, 9938 (2018)
An analysis and evaluation of the WeFold collaborative for protein structure prediction and its pipelines in CASP11 and CASP12. Scientific Reports 27.
Zeitschriftenartikel
46 (W1), S. W215 - W220 (2018)
The BaMM web server for de-novo motif discovery and regulatory sequence analysis. Nucleic Acids Research 28.
Zeitschriftenartikel
9, 2542 (2018)
Clustering huge protein sequence sets in linear time. Nature Communications 29.
Zeitschriftenartikel
35 (11), S. 1026 - 1028 (2017)
MMseqs2 enables sensitive protein sequence searching for the analysis of massive data sets. Nature Biotechnology 30.
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33 (19), S. 3113 - 3114 (2017)
WIsH: Who is the host? Predicting prokaryotic hosts from metagenomic phage contigs. Bioinformatics 31.
Zeitschriftenartikel
66 (1), S. 38 - 49 (2017)
Genome-wide analysis of RNA polymerase II termination at protein-coding genes. Molecular Cell 32.
Zeitschriftenartikel
355 (6322), S. 248 - 249 (2017)
Big-data approaches to protein structure prediction. Science 33.
Zeitschriftenartikel
45 (D1), S. D170 - D176 (2017)
Uniclust databases of clustered and deeply annotated protein sequences and alignments. Nucleic Acids Research 34.
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44 (13), S. 6055 - 6069 (2016)
Bayesian Markov models consistently outperform PWMs at predicting motifs in nucleotide sequences. Nucleic Acids Research 35.
Zeitschriftenartikel
44 (W1), S. W410 - W415 (2016)
The MPI bioinformatics Toolkit as an integrative platform for advanced protein sequence and structure analysis. Nucleic Acids Research 36.
Zeitschriftenartikel
32 (9), S. 1323 - 1330 (2016)
MMseqs software suite for fast and deep clustering and searching of large protein sequence sets. Bioinformatics 37.
Zeitschriftenartikel
61 (2), S. 247 - 259 (2016)
Modulations of DNA contacts by linker histones and post-translational modifications determine the mobility and modifiability of nucleosomal H3 tails. Molecular Cell 38.
Zeitschriftenartikel
4, e09410 (2015)
A vocabulary of ancient peptides at the origin of folded proteins. eLife 39.
Zeitschriftenartikel
11 (10), e1004343 (2015)
Automatic prediction of protein 3D Structures by probabilistic multi-template homology modeling. PLoS Computational Biology 40.
Zeitschriftenartikel
83 (10), S. 1849 - 1858 (2015)
Structure of Ctk3, a subunit of the RNA polymerase II CTD kinase complex, reveals a non-canonical CTD-interacting domain fold. Proteins: Structure, Function, and Bioinformatics