Publikationen von Aukje Marieke Oudelaar
Alle Typen
Zeitschriftenartikel (30)
1.
Zeitschriftenartikel
FACT maintains chromatin architecture and thereby stimulates RNA polymerase II pausing during transcription in vivo. Molecular Cell (2024)
2.
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56, S. 483 - 492 (2024)
In vitro reconstitution of chromatin domains shows a role for nucleosome positioning in 3D genome organization. Nature Genetics 3.
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52 (2), S. 793 - 802 (2024)
Genome organization across scales: mechanistic insights from in vitro reconstitution studies. Biochemical Society Transactions 4.
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30 (7), S. 876 - 877 (2023)
The Mediator complex regulates long-range communication in the genome. Nature Structural & Molecular Biology 5.
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30, S. 991 - 1000 (2023)
The Mediator complex regulates enhancer-promoter interactions. Nature Structural and Molecular Biology 6.
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79, 102022 (2023)
The role of loop extrusion in enhancer-mediated gene activation. Current Opinion in Genetics & Development 7.
Zeitschriftenartikel
54 (7), S. 914 - 915 (2022)
Deciphering the regulatory logic of a chromatin domain boundary. Nature Genetics 8.
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13, 2139 (2022)
Analysis of sub-kilobase chromatin topology reveals nano-scale regulatory interactions with variable dependence on cohesin and CTCF. Nature Communications 9.
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17 (2), S. 445 - 475 (2022)
Capture-C: a modular and flexible approach for high-resolution chromosome conformation capture. Nature Protocols 10.
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13, 773 (2022)
Dynamic Runx1 chromatin boundaries affect gene expression in hematopoietic development. Nature Communications 11.
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12, 4439 (2021)
Reactivation of a developmentally silenced embryonic globin gene. Nature Communications 12.
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595 (7865), S. 125 - 129 (2021)
Defining genome architecture at base-pair resolution. Nature 13.
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12, 3806 (2021)
A gain-of-function single nucleotide variant creates a new promoter which acts as an orientation-dependent enhancer-blocker. Nature Communications 14.
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67, S. 18 - 24 (2021)
The mouse alpha-globin cluster: A paradigm for studying genome regulation and organization. Current Opinion in Genetics & Development 15.
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81 (5), S. 983 - 997.e7 (2021)
Enhancers predominantly regulate gene expression during differentiation via transcription initiation. Molecular Cell 16.
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22, S. 154 - 168 (2021)
The relationship between genome structure and function. Nature Reviews Genetics 17.
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12, 531 (2021)
High-resolution targeted 3C interrogation of cis-regulatory element organization at genome-wide scale. Nature Communications 18.
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17 (11), S. 1118 - 1124 (2020)
DeepC: predicting 3D genome folding using megabase-scale transfer learning. Nature Methods 19.
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11, 2722 (2020)
Dynamics of the 4D genome during in vivo lineage specification and differentiation. Nature Communications 20.
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30 (7), S. 2125 - 2135.e1-e5 (2020)
A dynamic folded hairpin conformation is associated with α-globin activation in erythroid cells. Cell Reports