Publikationen von Maxim Igaev

Zeitschriftenartikel (10)

1.
Zeitschriftenartikel
Kalutskii, M.; Grubmüller, H.; Volkov, V. A.; Igaev, M.: Microtubule dynamics are defined by conformations and stability of clustered protofilaments. Proceedings of the National Academy of Sciences of the United States of America 122 (22), e2424263122 (2025)
2.
Zeitschriftenartikel
Lawson, C. L.; Kryshtafovych, A.; Pintilie, G. D.; Burley, S. K.; Černý, J.; Chen, V. B.; Emsley, P.; Gobbi, A.; Joachimiak, A.; Noreng, S. et al.; Prisant, M. G.; Read, R. J.; Richardson, J. S.; Rohou, A. L.; Schneider, B.; Sellers, B. D.; Shao, C.; Sourial, E.; Williams, C. I.; Williams, C. J.; Yang, Y.; Abbaraju, V.; Afonine, P. V.; Baker, M. L.; Bond, P. S.; Blundell, T. L.; Burnley, T.; Campbell, A.; Cao, R.; Cheng, J.; Chojnowski, G.; Cowtan, K. D.; DiMaio, F.; Esmaeeli, R.; Giri, N.; Grubmüller, H.; Hoh, S. W.; Hou, J.; Hryc, C. F.; Hunte, C.; Igaev, M.; Joseph, A. P.; Kao, W.-C.; Kihara, D.; Kumar, D.; Lang, L.; Lin, S.; Subramaniya, S. R. M. V.; Mittal, S.; Mondal, A.; Moriarty, N. W.; Muenks, A.; Murshudov, G. N.; Nicholls, R. A.; Olek, M.; Palmer, C. M.; Perez, A.; Pohjolainen, E.; Pothula, K. R.; Rowley, C. N.; Sarkar, D.; Schäfer, L. U.; Schlicksup, C. J.; Schröder, G. F.; Shekhar, M.; Si, D.; Singharoy, A.; Sobolev, O. V.; Terashi, G.; Vaiana, A. C.; Vedithi, S. C.; Verburgt, J.; Wang, X.; Warshamanage, R.; Winn, M. D.; Weyand, S.; Yamashita, K.; Zhao, M.; Schmid, M. F.; Berman, H. M.; Chiu, W.: Outcomes of the EMDataResource cryo-EM Ligand Modeling Challenge. Nature Methods 21, S. 1340 - 1348 (2024)
3.
Zeitschriftenartikel
Bock, L. V.; Igaev, M.; Grubmüller, H.: Single-particle Cryo-EM and molecular dynamics simulations: A perfect match. Current Opinion in Structural Biology 86, 102825 (2024)
4.
Zeitschriftenartikel
Igaev, M.; Grubmüller, H.: Bending-torsional elasticity and energetics of the plus-end microtubule tip. Proceedings of the National Academy of Sciences of the United States of America 119 (12), e2115516119 (2022)
5.
Zeitschriftenartikel
Jahnke, K.; Grubmüller, H.; Igaev, M.; Göpfrich, K.: Choice of fluorophore affects dynamic DNA nanostructures. Nucleic Acids Research 49 (7), S. 4186 - 4195 (2021)
6.
Zeitschriftenartikel
Lawson, C. L.; Kryshtafovych, A.; Adams, P. D.; Afonine, P. V.; Baker, M. L.; Barad, B. A.; Bond, P.; Burnley, T.; Cao, R.; Cheng, J. et al.; Chojnowski, G.; Cowtan, K.; Dill, K. A.; DiMaio, F.; Farrell, D. P.; Fraser, J. S.; Herzik Jr., M. A. H.; Hoh, S. W.; Hou, J.; Hung, L.-W.; Igaev, M.; Joseph, A. P.; Kihara, D.; Kumar, D.; Mittal, S.; Monastyrskyy, B.; Olek, M.; Palmer, C. M.; Patwardhan, A.; Perez, A.; Pfab, J.; Pintilie, G. D.; Richardson, J. S.; Rosenthal, P. B.; Sarkar, D.; Schäfer, L. U.; Schmid, M. F.; Schröder, G. F.; Shekhar, M.; Si, D.; Singharoy, A.; Terashi, G.; Terwilliger, T. C.; Vaiana, A.; Wang, L.; Wang, Z.; Wankowicz, S. A.; Williams, C. J.; Winn, M.; Wu, T.; Yu, X.; Zhang, K.; Berman, H. M.; Chiu, W.: Cryo-EM model validation recommendations based on outcomes of the 2019 EMDataResource challenge. Nature Methods 18, S. 156 - 164 (2021)
7.
Zeitschriftenartikel
Igaev, M.; Grubmüller, H.: Microtubule instability driven by longitudinal and lateral strain propagation. PLoS Computational Biology 16 (9), e1008132 (2020)
8.
Zeitschriftenartikel
Nagy, G.; Igaev, M.; Hoffmann, S. V.; Jones, N. C.; Grubmüller, H.: SESCA: Predicting circular dichroism spectra from protein molecular structures. Journal of Chemical Theory and Computation 15 (9), S. 5087 - 5102 (2019)
9.
Zeitschriftenartikel
Igaev, M.; Kutzner, C.; Bock, L. V.; Vaiana, A. C.; Grubmüller, H.: Automated cryo-EM structure refinement using correlation-driven molecular dynamics. eLife 8, e43542 (2019)
10.
Zeitschriftenartikel
Igaev, M.; Grubmüller, H.: Microtubule assembly governed by tubulin allosteric gain in flexibility and lattice induced fit. eLife 7, e34353 (2018)

Konferenzbeitrag (6)

11.
Konferenzbeitrag
Blom, K.; Igaev, M.; Godec, A.; Grubmüller, H.: Collective mechanochemical effects in microtubule dynamics: Theory and simulations. 64th Annual Meeting of the Biophysical-Society, San Diego, CA, 15. Februar 2020 - 19. Februar 2020. Biophysical Journal 118 (Suppl_1), 3 Aufl., S. 31A - 32A (2020)
12.
Konferenzbeitrag
Igaev, M.; Kutzner, C.; Bock, L. V.; Vaiana, A. C.; Grubmüller, H.: Automated cryo-EM structure refinement using correlation -driven molecular dynamics. Joint 12th EBSA European Biophysics Congress / 10th IUPAP International Conference on Biological Physics (ICBP), Madrid, Spain, 20. Juli 2019 - 24. Juli 2019. European Biophysics Journal 48 (Suppl 1), S. S126 - S126 (2019)
13.
Konferenzbeitrag
Igaev, M.; Grubmüller, H.: Long-range mechanical coupling in the microtubule lattice. 63rd Annual Meeting of the Biophysical-Society , Baltimore, MD, 02. März 2019 - 06. März 2019. Biophysical Journal 116 (Suppl_1), S. 256A - 256A (2019)
14.
Konferenzbeitrag
Igaev, M.; Grubmüller, H.: Nucleotide-dependent conformational dynamics and energetics of tubulin. 62nd Annual Meeting of the Biophysical-Society , San Francisco, CA , 17. Februar 2018 - 21. Februar 2018. Biophysical Journal 114 (Suppl), 3 Aufl., S. 504a - 504a (2018)
15.
Konferenzbeitrag
Vaiana, A. C.; Igaev, M.; Kutzner, C.; Grubmüller, H.: Fully automated correlation-based refinement of atomic models into high resolution cryo-EM density maps. 62nd Annual Meeting of the Biophysical-Society, San Francisco, CA, 17. Februar 2018 - 21. Februar 2018. Biophysical Journal 114 (3), S. 161a - 161a (2018)
16.
Konferenzbeitrag
Igaev, M.; Grubmüller, H.: Dynamics and energetics of intrinsic tubulin bending: Novel implications for microtubule assembly. 19th IUPAB Congress / 11th EBSA Congress, Edinburgh, Scotland, 16. Juli 2017 - 20. Juli 2017. European Biophysics Journal 46 (Suppl_1), S. S217 - S217 (2017)

Review Article (1)

17.
Review Article
Igaev, M.; Grubmüller, H.: Force generation by polymerizing and depolymerizing microtubules. High-performance computing and data science in the Max Planck Society, S. 52 - 54 (2021)

Preprint (1)

18.
Preprint
Kalutskii, M.; Grubmüller, H.; Volkov, V. A.; Igaev, M.: Microtubule dynamics are defined by conformations and stability of clustered protofilaments. bioRxiv (2024)
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