Publications

151.

Journal Article

Stebler, J.; Spieler, D.; Slanchev, K.; Molyneaux, K. A.; Richter, U.; Cojocaru, V.; Tarabykin, V.; Wylie, C.; Kessel, M.; Raz, E.: Primordial germ cell migration in the chick and mouse embryo: the role of the chemokine SDF-1/CXCL12. Developmental Biology 272 (2), pp. 351 - 361 (2004)

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152.

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Ben Abdelkhalek, H.; Beckers, A.; Schuster-Gossler, K.; Pavlova, M. N.; Burkhardt, H.; Lickert, H.; Rossant, J.; Reinhardt, R.; Schalkwyk, L. C.; Mueller, I. et al.; Herrmann, B. G.; Ceolin, M.; Rivera-Pomar, R.; Gossler, A.: The mouse homeobox gene Not is required for caudal notochord development and affected by the truncate mutation. Genes and Development 18 (14), doi:10.1101/gad.303504, pp. 1725 - 1736 (2004)

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153.

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Rieger, B.; Molenaar, C.; Dirks, R. W.; van Vliet, L. J.: Alignment of the cell nucleus from labeled proteins only for 4D in vivo imaging. Microscopy Research and Technique 64, doi:10.1002/jemt.20069, pp. 142 - 150 (2004)

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154.

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Bastiaens, P. I. H.; Hell, S. W.: Light microscopy on the move - Introduction. Journal of Structural Biology 147 (1), pp. 1 - 2 (2004)

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155.

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Masarik, M.; Stobiecka, A.; Kizek, R.; Jelen, F.; Pechan, Z.; Hoyer, W.; Jovin, T. M.; Subramaniam, V.; Palecek, E.: Sensitive electrochemical detection of native and aggregated α-synuclein protein involved in Parkinson's Disease. Electroanalysis 16 (13-14), doi:10.1002/elan.200403009, pp. 1172 - 1181 (2004)

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156.

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Hoyer, W.; Cherny, D. I.; Subramaniam, V.; Jovin, T. M.: Rapid self-assembly of α-synuclein observed by in situ atomic force microscopy. Journal of Molecular Biology 340 (1), pp. 127 - 139 (2004)

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157.

Journal Article

Hernandez, G.; Vazquez-Pianzola, P.; Zurbriggen, M.; Altmann, M.; Sierra, J. M.; Rivera-Pomar, R.: Two functionally redundant isoforms of Drosophila melanogaster eukaryotic initiation factor 4B are involved in cap-dependent translation, cell survival and proliferation. European Journal of Biochemistry 271 (14), doi:10.1111/j.1432-1033.2004.04217.x, pp. 2923 - 2926 (2004)

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158.

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Rieger, B.; Timmermans, F. J.; van Vliet, L. J.; Verbeek, P. W.: On curvature estimation of ISO surfaces in 3D gray-value images and the computation of shape descriptors. IEEE Transactions on Pattern Analysis and Machine Intelligence 26 (8), pp. 1088 - 1094 (2004)

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159.

Journal Article

Vijayanathan, V.; Thomas, T.; Antony, T.; Shirahata, A.; Thomas, T. J.: Formation of DNA nanoparticles in the presence of novel polyamine analogues: a laser light scattering and atomic force microscopic study. Nucleic Acids Research 32 (1), DOI: 10.1093/nar/gkg936, pp. 127 - 134 (2004)

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160.

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Zweckstetter, M.; Hummer, G.; Bax, A.: Prediction of charge-induced molecular alignment of biomolecules dissolved in dilute liquid-crystalline phases. Biophysical Journal 86 (6), pp. 3444 - 3460 (2004)

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161.

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Kuhn, H.; Cherny, D. I.; Demidov, V. V.; Frank-Kamenetskii, M. D.: Inducing and modulating anisotropic DNA bends by pseudocomplementary peptide nucleic acids. Proceedings of the National Academy of Sciences of the United States of America 101 (20), doi:10.1073/pnas.0308756101, pp. 7548 - 7553 (2004)

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162.

Journal Article

Beutler, M.; Wiltshire, K. H.; Reineke, C.; Hansen, U. P.: Algorithms and practical fluorescence models of the photosynthetic apparatus of red cyanobacteria and Cryptophyta designed for the fluorescence detection of red cyanobacteria and cryptophytes. Aquatic Microbial Ecology 35, pp. 115 - 129 (2004)

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163.

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Fernandez, C. O.; Hoyer, W.; Zweckstetter, M.; Jares-Erijman, E. A.; Subramaniam, V.; Griesinger, C.; Jovin, T. M.: NMR of α-synuclein-polyamine complexes elucidates the mechanism and kinetics of induced aggregation. EMBO Journal 23, doi:10.1038/sj.emboj.7600211, pp. 2039 - 2046 (2004)

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164.

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Wheeler, D.; Chrambach, A.; Ashburn, P.; Jovin, T. M.: Discontinuous buffer systems operative at ph 2.5 - 11.0, 0^°C and 25^°C, available on the Internet. Electrophoresis 25 (7-8), DOI: 10.1002/elps.200305799, pp. 973 - 974 (2004)

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165.

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Heintzmann, R.; Lidke, K. A.; Jovin, T. M.: Double-pass Fourier transform imaging spectroscopy. Optics Express 12, pp. 753 - 763 (2004)

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166.

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Hernandez, G.; Lalioti, V.; Vandekerckhove, J.; Sierra, J. M.; Santaren, J. F.: Identification and characterization of the expression of the translation initiation factor 4A (eIF4A) from Drosophila melanogaster. Proteomics 4, DOI 10.1002/pmic.2003300555, pp. 316 - 326 (2004)

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167.

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Rieger, B.; van Vliet, L. J.: A systematic approach to nD orientation representation. Image & Vision Computing 22 (6), doi:10.1016/j.imavis.2003.11.005, pp. 453 - 459 (2004)

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168.

Journal Article

Shchyolkina, A. K.; Kaluzhny, D. N.; Borisova, O. F.; Hawkins, M. E.; Jernigan, R. L.; Jovin, T. M.; Arndt-Jovin, D. J.; Zhurkin, V. B.: Formation of an intramolecular triple-stranded DNA structure monitored by fluorescence of 2-aminopurine or 6-methylisoxanthopterin. Nucleic Acids Research 32 (2), DOI: 10.1093/nar/gkh158, pp. 432 - 440 (2004)

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169.

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Kapanen, A. I.; Tanner, M.; Junttila, T.; Nagy, P.; Elenius, K.; Karhu, R.; Grenman, S.; Elo, J.; Isola, J.: Trastuzumab insensitivity despite HER-2 receptor down-regulation and internalization in a novel cell line established from a Herceptinresistant breast cancer patient. Clinical Cancer Research 9 (16), p. 6103S - 6103S (2003)

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170.

Journal Article

Jares-Erijman, E. A.; Jovin, T. M.: FRET Imaging. Nature biotechnology 21 (11), pp. 1387 - 1395 (2003)

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171.

Journal Article

Kaluzhny, D. N.; Mikhailov, S. N.; Efimtseva, E. V.; Borisova, O. F.; Florentiev, V. L.; Shchyolkina, A. K.; Jovin, T. M.: Fluorescent 2-pyrimidinone nucleoside in parallel-stranded DNA. Nucleosides Nucleotides and Nucleic Acids 22 (5-8), pp. 1499 - 1503 (2003)

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172.

Journal Article

Shchyolkina, A. K.; Kaluzhny, D. N.; Borisova, O. F.; Arndt-Jovin, D. J.; Jovin, T. M.; Zhurkin, V. B.: Formation of the parallel recombination-type triplex by human telomeric sequences. Journal of Biomolecular Structure and Dynamics 20 (6), pp. 868 - 869 (2003)

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173.

Journal Article

Bronfman, F. C.; Tcherpakov, M.; Jovin, T. M.; Fainzilber, M.: Ligand-induced internalization of the p75 neurotrophin receptor: a slow route to the signaling endosome. Journal of Neuroscience 23 (8), pp. 3209 - 3220 (2003)

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174.

Journal Article

Nagy, P.; Arndt-Jovin, D. J.; Jovin, T. M.: Small interfering RNAs suppress the expression of endogenous and GFP-fused epidermal growth factor receptor (erbB1) and induce apoptosis in erbB1-overexpressing cells. Experimental Cell Research 285 (1), pp. 39 - 49 (2003)

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175.

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Ivanova, V. P.; Makarov, I.; Schaeffer, T. E.; Heimburg, T.: Analyzing heat capacity profiles of peptide-containing membranes: Cluster formation of gramicidin A. Biophysical Journal 84 (4), pp. 2427 - 2439 (2003)

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176.

Journal Article

Bodnar, A.; Bacso, Z.; Jenei, A.; Jovin, T. M.; Edidin, M.; Damjanovich, S.; Matko, J.: Class IHLA oligomerization at the surface of B cells is controlled by exogenous β₂-microglobulin: implications in activation of cytotoxic T lymphocytes. International Immunology 15 (3), pp. 331 - 339 (2003)

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177.

Journal Article

Brock, R.; Jovin, T. M.: Quantitative image analysis of cellular protein translocation induced by magnetic microspheres: application to the EGF receptor. Cytometry Part A 52 A, pp. 1 - 11 (2003)

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178.

Journal Article

Pomar, N.; Berlanga, J. J.; Campuzano, S.; Hernandez, G.; Elias, M.; de Haro, C.: Functional characterization of Drosophila melanogaster PERK eukaryotic initiation factor 2α (elF2α) kinase. European Journal of Biochemistry 270, pp. 293 - 306 (2003)

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179.

Journal Article

Antony, T.; Hoyer, W.; Cherny, D. I.; Heim, G.; Jovin, T. M.; Subramaniam, V.: Cellular polyamines promote the aggregation of α-synuclein. Journal of Biological Chemistry 278 (5), pp. 3235 - 3240 (2003)

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180.

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Espinosa, J. M.; Portal, D.; Lobo, G. S.; Pereira, C. A.; Alonso, G. D.; Gomez, E. B.; Humbert-Lan, G.; Rivera-Pomar, R.; Flawia, M. M.; Torres, H. N.: Trypanosoma cruzi poly-zinc finger protein: a novel DNA/RNA-binding CCHC-zinc finger protein. Molecular and Biochemical Parasitology 131 (1), doi: 10.1016/S0166-6851(03)00187-7, pp. 35 - 44 (2003)

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181.

Journal Article

Heintzmann, R.: Saturated patterned excitation microscopy with two-dimensional excitation patterns. Micron 34, pp. 283 - 291 (2003)

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182.

Journal Article

Heintzmann, R.; Sarafis, V.; Munroe, P.; Nailon, J.; Hanley, Q. S.; Jovin, T. M.: Resolution enhancement by subtraction of confocal signals taken at different pinhole sizes. Micron 34, pp. 293 - 300 (2003)

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183.

Journal Article

Jovin, T. M.: Quantum dots finally come of age. Nature biotechnology 21 (1), pp. 32 - 33 (2003)

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184.

Journal Article

Lidke, D. S.; Nagy, P.; Barisas, B. G.; Heintzmann, R.; Post, J. N.; Lidke, K. A.; Clayton, A. H. A.; Arndt-Jovin, D. J.; Jovin, T. M.: Imaging molecular interactions in cells by dynamic and static fluorescence anisotropy (rFLIM and emFRET). Biochemical Society Transactions 31 (5), pp. 1020 - 1027 (2003)

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185.

Journal Article

Rasia, R. M.; Ceolin, M.; Vila, A. J.: Grafting a new metal ligand in the cocatalytic site of B. cereus metallo-β-lactamase: Structural flexibility without loss of activity. Protein Science 12, pp. 1538 - 1546 (2003)

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186.

Journal Article

Rodriguez-Caso, C.; Rodriguez-Agudo, D.; Moya-Garcia, A. A.; Fajardo, I.; Medina, M. A.; Subramaniam, V.; Sanchez-Jimenez, F.: Local changes in the catalytic site of mammalian histidine decarboxylase can affect its global conformation and stability. European Journal of Biochemistry 270, pp. 4376 - 4387 (2003)

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187.

Journal Article

Shchyolkina, A. K.; Borisova, O. F.; Livshits, M. A.; Jovin, T. M.: Parallel-stranded DNA with natural base sequences. Molecular Biology 37 (2), pp. 223 - 231 (2003)

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188.

Journal Article

Habuchi, S.; Cotlet, M.; Hofkens, J.; Dirix, G.; Michiels, J.; Vanderleyden, J.; Subramaniam, V.; De Schryver, F. C.: Resonance energy transfer in a calcium concentration-dependent cameleon protein. Biophysical Journal 83 (6), pp. 3499 - 3506 (2002)

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189.

Journal Article

Ingelfinger, D.; Arndt-Jovin, D. J.; Luehrmann, R.; Achsel, T.: The human LSm1-7 proteins colocalize with the mRNA-degrading enzymes Dcp1/2 and Xrn1 in distinct cytoplasmic foci. RNA-A Publication of the RNA Society 8 (12), pp. 1489 - 1501 (2002)

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190.

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Brazdova, M.; Palecek, J.; Cherny, D. I.; Billova, S.; Fojta, M.; Pecinka, P.; Vojtesek, B.; Jovin, T. M.; Palecek, E.: Role of tumor suppressor p53 domains in selective binding to supercoiled DNA. Nucleic Acids Research 30 (22), pp. 4966 - 4974 (2002)

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191.

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Nagy, P.; Vereb, G.; Sebestyen, Z.; Horvath, G.; Lockett, S. J.; Damjanovich, S.; Park, J. W.; Jovin, T. M.; Szoelloesi, J.: Lipid rafts and the local density of ErbB proteins influence the biological role of homo- and heteroassociations of ErbB2. Journal of Cell Science 115 (22), pp. 4251 - 4262 (2002)

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192.

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Goehler, T.; Reimann, M.; Cherny, D. I.; Walter, K.; Warnecke, G.; Kim, E.; Deppert, W.: Specific interaction of p53 with target binding sites is determined by DNA conformation and is regulated by the C- terminal domain. Journal of Biological Chemistry 277 (43), pp. 41192 - 41203 (2002)

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193.

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Ramirez, F. J.; Thomas, T. J.; Antony, T.; Ruiz-Chica, J.; Thomas, T.: Effects of aminooxy analogues of biogenic polyamines on aggregation and stability of calf thymus DNA. Biopolymers 65 (2), pp. 148 - 157 (2002)

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194.

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Katz, M.; Shtiegman, K.; Tal-Or, P.; Yakir, L.; Mosesson, Y.; Harari, D.; Machluf, Y.; Asao, H.; Jovin, T. M.; Sugamura, K. et al.; Yarden, Y.: Ligand-independent degradation of epidermal growth factor receptor involves receptor ubiquitylation and hgs, an adaptor whose ubiquitin-interacting motif targets ubiquitylation by Nedd4. Traffic 3 (10), pp. 740 - 751 (2002)

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195.

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Pavlov, N. A.; Cherny, D. I.; Jovin, T. M.; Slesarev, A. I.: Nucleosome-like complex of the histone from the hyperthermophile Methanopyrus kandleri (MkaH) with linear DNA. Journal of Biomolecular Structure & Dynamics 20 (2), pp. 207 - 214 (2002)

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196.

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Kruglik, S. G.; Subramaniam, V.; Greve, J.; Otto, C.: Resonance CARS study of the structure of "green" and "red" chromophores within the red fluorescent protein DsRed. Journal of the American Chemical Society 124 (37), pp. 10992 - 10993 (2002)

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197.

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Hoyer, W.; Antony, T.; Cherny, D. I.; Heim, G.; Jovin, T. M.; Subramaniam, V.: Dependence of α-synuclein aggregate morphology on solution conditions. Journal of Molecular Biology 322 (2), pp. 383 - 393 (2002)

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198.

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Clayton, A. H. A.; Hanley, Q. S.; Arndt-Jovin, D. J.; Subramaniam, V.; Jovin, T. M.: Dynamic fluorescence anisotropy imaging microscopy in the frequency domain (rFLIM). Biophysical Journal 83 (3), pp. 1631 - 1649 (2002)

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199.

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Blum, C.; Subramaniam, V.; Schleifenbaum, F.; Stracke, F.; Angres, B.; Terskikh, A.; Meixner, A. J.: Single molecule fluorescence spectroscopy of mutants of the Discosoma red fluorescent protein DsRed. Chemical Physics Letters 362 (5-6), pp. 355 - 361 (2002)

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200.

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Sacchetti, A.; Subramaniam, V.; Jovin, T. M.; Alberti, S.: Oligomerization of DsRed is required for the generation of a functional red fluorescent chromophore. FEBS Letters 525 (1-3), pp. 13 - 19 (2002)

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Journal Article (647)