Zeitschriftenartikel (133)

51.
Zeitschriftenartikel
Weissmann, F.; Petzold, G.; VanderLinden, R.; in'T Veld, P. J. H.; Brown, N. G.; Lampert, F.; Westermann, S.; Stark, H.; Schulman, B. A.; Peters, J. M.: biGBac enables rapid gene assembly for the expression of large multisubunit protein complexes. Proceedings of the National Academy of Sciences of the United States of America 113 (19), S. E2564 - E2569 (2016)
52.
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Agafonov, D. E.; Kastner, B.; Dybkov, O.; Hofele, R. V.; Liu, W.; Urlaub, H.; Lührmann, R.; Stark, H.: Molecular architecture of the human U4/U6.U5 tri-snRNP. Science 351 (6280), S. 1416 - 1420 (2016)
53.
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Stark, H.; Chari, A.: Sample preparation of biological macromolecular assemblies for the determination of high-resolution structures by cryo-electron microscopy. Microscopy 65 (1), S. 23 - 34 (2016)
54.
Zeitschriftenartikel
Pleiner, T.; Bates, M.; Trakhanov, S.; Lee, C. T.; Schliep, J. E.; Chug, H.; Böhning, M.; Stark, H.; Urlaub, H.; Görlich, D.: Nanobodies: Site-specific labeling for super-resolution imaging, rapid epitope-mapping and native protein complex isolation. eLife 4, e11349 (2015)
55.
Zeitschriftenartikel
Chari, A.; Haselbach, D.; Kirves, J. M.; Ohmer, J.; Paknia, E.; Fischer, N.; Ganichkin, O.; Moller, V.; Frye, J. J.; Petzold, G. et al.; Jarvis, M.; Tietzel, M.; Grimm, C.; Peters, J. M.; Schulman, B. A.; Tittmann, K.; Markl, J.; Fischer, U.; Stark, H.: ProteoPlex: Stability optimization of macromolecular complexes by sparse-matrix screening of chemical space. Nature Methods 12 (9), S. 859 - 865 (2015)
56.
Zeitschriftenartikel
Hauer, F.; Gerle, C.; Fischer, N.; Oshima, A.; Shinzawa-Itoh, K.; Shimada, S.; Yokoyama, K.; Fujiyoshi, Y.; Stark, H.: GraDeR: Membrane protein complex preparation for single-particle cryo-EM. Structure 23 (9), S. 1769 - 1775 (2015)
57.
Zeitschriftenartikel
Lin , Y. J.; Liu, W.; Stark, H.; Huang, C. T.: Expression of enterovirus 71 virus-like particles in transgenic enoki (Flammulina velutipes). Applied Microbiology and Biotechnology 99 (16), S. 6765 - 6774 (2015)
58.
Zeitschriftenartikel
Martinez-Rucobo, F. W.; Kohler, R.; Waterbeemd, M. v. d.; Heck, A. J.; Hemann, M.; Herzog, F.; Stark, H.; Cramer, P.: Molecular basis of transcription-coupled pre-mRNA capping. Molecular Cell 58 (6), S. 1079 - 1089 (2015)
59.
Zeitschriftenartikel
Brown, N. G.; VanderLinden, R.; Watson, E. R.; Qiao, R. P.; Grace, C. R. R.; Yamaguchi, M.; Weissmann, F.; Frye, J. J.; Dube, P.; Cho, S. E. et al.; Actis, M. L.; Rodrigues, P.; Fujii, N.; Peters, J. M.; Stark, H.; Schulman, B. A.: RING E3 mechanism for ubiquitin ligation to a disordered substrate visualized for human anaphase-promoting complex. Proceedings of the National Academy of Sciences of the United States of America 112 (17), S. 5272 - 5279 (2015)
60.
Zeitschriftenartikel
Fischer, N.; Neumann, P.; Konevega, A. L.; Bock, L. V.; Ficner, R.; Rodnina, M. V.; Stark, H.: Structure of the E. coli ribosome–EF-Tu complex at <3 Å resolution by Cs-corrected cryo-EM. Nature 520 (7548), S. 567 - 570 (2015)
61.
Zeitschriftenartikel
Brown, N. G.; Watson, E. R.; Weissmann, F.; Jarvis, M. A.; VanderLinden, R.; Grace, C.R.R.; Frye, J. J.; Qiao, R.; Dube, P.; Petzold, G. et al.; Cho, S. E.; Alsharif, O.; Bao, J.; Davidson, I.F.; Zheng, J. J.; Nourse, A.; Kurinov, I.; Peters, J. M.; Stark, H.; Schulman, B. A.: Mechanism of polyubiquitination by human anaphase-promoting complex: RING repurposing for ubiquitin chain assembly. Molecular Cell 56 (2), S. 246 - 260 (2014)
62.
Zeitschriftenartikel
Liu, Y.; Neumann, P.; Kuhle, B.; Monecke, T.; Schell, S.; Chari, A.; Ficner, R.: Translation initiation factor eIF3b contains a nine-bladed beta-propeller and interacts with the 40S ribosomal subunit. Structure 22 (6), S. 923 - 930 (2014)
63.
Zeitschriftenartikel
Bock, L. V.; Blau, C.; Schröder, G. F.; Davydov, I. I.; Fischer, N.; Stark, H.; Rodnina, M. V.; Vaiana, A. C.; Grubmüller, H.: Energy barriers and driving forces in tRNA translocation through the ribosome. Nature Structural and Molecular Biology 20 (12), S. 1390 - 1396 (2013)
64.
Zeitschriftenartikel
Doelker, N.; Blanchet, C. E.; Voss, B.; Haselbach, D.; Kappel, C.; Monecke, T.; Svergun, D. I.; Stark, H.; Ficner, R.; Zachariae, U. et al.; Grubmüller, H.; Dickmanns, A.: Structural determinants and mechanism of mammalian CRM1 allostery. Structure 21 (8), S. 1350 - 1360 (2013)
65.
Zeitschriftenartikel
Frye, J.; Brown, N. G.; Petzold, G.; Watson, E. R.; Grace, C. R. R.; Nourse, A.; Jarvis, M. A.; Kriwacki, R. W.; Peters, J. M.; Stark, H. et al.; Schulman, B. A.: Electron microscopy structure of human APC/C-CDH1-EMI1 reveals multimodal mechanism of E3 ligase shutdown. Nature Structural and Molecular Biology 20 (7), S. 827 - 835 (2013)
66.
Zeitschriftenartikel
Grimm, C.; Chari, A.; Pelz, J. P.; Kuper, J.; Kisker, C.; Diederichs, K.; Stark, H.; Schindelin, H.; Fischer, U.: Structural basis of assembly chaperone- mediated snRNP formation. Molecular Cell 49 (4), S. 692 - 703 (2013)
67.
Zeitschriftenartikel
Hauer, F.; Gerle, C.; Kirves, J. M.; Stark, H.: Automated correlation of single particle tilt pairs for Random Conical Tilt and Orthogonal Tilt Reconstructions. Journal of Structural Biology 181 (2), S. 149 - 154 (2013)
68.
Zeitschriftenartikel
Monecke, T.; Haselbach, D.; Voß, D.; Russek, A.; Neumann, P.; Thomson, E.; Hurt, E.; Zachariae, U.; Stark, H.; Grubmüller, H. et al.; Dickmanns, A.; Ficner, R.: Structural basis for cooperativity of CRM1 export complex formation. Proceedings of the National Academy of Sciences of the United States of America 110 (3), S. 960 - 965 (2013)
69.
Zeitschriftenartikel
Khoshnevis, S.; Hauer, F.; Milon, P.; Stark, H.; Ficner, R.: Novel insights into the architecture and protein interaction network of yeast eIF3. RNA 18 (12), S. 2306 - 2319 (2012)
70.
Zeitschriftenartikel
Uzunova, K.; Dye, B. T.; Schutz, H.; Ladurner, R.; Petzold, G.; Toyoda, Y.; Jarvis, M. A.; Brown, N. G.; Poser, I.; Novatchkova, M. et al.; Mechtler, K.; Hyman, A. A.; Stark, H.; Schulman, B. A.; Peters, J. M.: APC15 mediates CDC20 autoubiquitylation by APC/C-MCC and disassembly of the mitotic checkpoint complex. Nature Structural and Molecular Biology 19 (11), S. 1116 - 1123 (2012)
71.
Zeitschriftenartikel
Brunotte, L.; Kerber, R.; Shang, W.; Hauer, F.; Hass, M.; Gabriel, M.; Lelke, M.; Busch, C.; Stark, H.; Svergun, D. I. et al.; Betzel, C.; Perbrandt, M.; Guenther, S.: Structure of the Lassa virus nucleoprotein revealed by X-ray crystallography, small-angle X-ray scattering, and electron microscopy. Journal of Biological Chemistry 286 (44), S. 38748 - 38756 (2011)
72.
Zeitschriftenartikel
Nikolov, M.; Stützer, A.; Mosch, K.; Krasauskas, A.; Soeroes, S.; Stark, H.; Urlaub, H.; Fischle, W.: Chromatin affinity purification and quantitative mass spectrometry defining the interactome of histone modification patterns. Molecular and Cellular Proteomics 10 (11), S. 10.1074/mcp.M110.005371-1 - 10.1074/mcp.M110.005371–16 (2011)
73.
Zeitschriftenartikel
Buschhorn, B. A.; Petzold, G.; Galova, M.; Dube, P.; Kraft, C.; Herzog, F.; Stark, H.; Peters, J. M.: Substrate binding on the APC/C occurs between the coactivator Cdh1 and the processivity factor Doc1. Nature Structural and Molecular Biology 18, S. 6 - 13 (2010)
74.
Zeitschriftenartikel
Golas, M. M.; Sander, B.; Bessonov, S.; Grote, M.; Wolf, E.; Kastner, B.; Stark, H.; Lührmann, R.: 3D cryo-EM structure of an active step I spliceosome and localization of its catalytic core. Molecular Cell 40 (6), S. 927 - 938 (2010)
75.
Zeitschriftenartikel
Bessonov, S.; Anokhina, M.; Krasauskas, A.; Golas, M. M.; Sander, B.; Will, C. L.; Urlaub, H.; Stark, H.; Lührmann, R.: Characterization of purified human Bact spliceosomal complexes reveals compositional and morphological changes during spliceosome activation and first step catalysis. RNA 16 (12), S. 2384 - 2403 (2010)
76.
Zeitschriftenartikel
Petrovic, A.; Pasqualato, S.; Dube, P.; Krenn, V.; Santaguida, S.; Cittaro, D.; Monzani, S.; Massimiliano, L.; Keller, J.; Tarricone, A. et al.; Maiolica, A.; Stark, H.; Musaccio, A.: The MIS12 complex is a protein interaction hub for outer kinetochore assembly. Journal of Cell Biology 190 (5), S. 835 - 852 (2010)
77.
Zeitschriftenartikel
Sander, B.; Golas, M. M.; Lührmann, R.; Stark, H.: An approach for de novo structure determination of dynamic molecular assemblies by electron cryomicroscopy. Structure 18 (6), S. 667 - 676 (2010)
78.
Zeitschriftenartikel
Hutchins, J. R. A.; Toyoda, Y.; Hegemann, B.; Poser, I.; Heriche, J. K.; Sykora, M. M.; Augsburg, M.; Hudecz, O.; Buschhorn, B. A.; Bulkescher, J. et al.; Conrad, C.; Comartin, D.; Schleiffer, A.; Sarov, M.; Pozniakovsky, A.; Slabicki, M. M.; Schloissnig, S.; Steinmacher, I.; Leuschner, M.; Ssykor, A.; Lawo, S.; Pelletier, L.; Stark, H.; Nasmyth, K.; Ellenberg, J.; Durbin, R.; Buchholz, F.; Mechtler, K.; Hyman, A. A.; Peters, J. M.: Systematic analysis of human protein complexes identifies chromosome segregation proteins. Science 328 (5978), S. 593 - 599 (2010)
79.
Zeitschriftenartikel
Fischer, N.; Konevega, A. L.; Wintermeyer, W.; Rodnina, M. V.; Stark, H.: Ribosome dynamics and tRNA movement by time-resolved electron cryomicroscopy. Nature 466 (7304), S. 329 - 333 (2010)
80.
Zeitschriftenartikel
Richter, F. M.; Sander, B.; Golas, M. M.; Stark, H.; Urlaub, H.: Merging molecular electron microscopy and mass spectrometry by carbon film-assisted endoproteinase digestion. Molecular and Cellular Proteomics 9, S. 1729 - 1741 (2010)
81.
Zeitschriftenartikel
Uezguen, S.; Akdemir, O.; Hasenpusch, G.; Mauksch, C.; Golas, M. M.; Sander, B.; Stark, H.; Imker, R.; Lutz, J. F.; Rudolph, C.: Characterization of tailor-made copolymers of oligo(ethylene glycol) methyl ether methacrylate and N,N-dimethylaminoethyl methacrylate as nonviral gene transfer agents: Influence of macromolecular structure on gene vector particle properties and transfection efficiency. Biomacromolecules 11 (1), S. 39 - 50 (2010)
82.
Zeitschriftenartikel
Warkocki, Z.; Odenwälder, P.; Schmitzova, J.; Platzmann, F.; Stark, H.; Urlaub, H.; Ficner, R.; Fabrizio, P.; Lührmann, R.: Reconstitution of both steps of S. cerevisiae splicing with purified spliceosomal components. Nature Structural and Molecular Biology 16 (12), S. 1237 - 1243 (2009)
83.
Zeitschriftenartikel
Elfinger, M.; Pfeifer, C.; Uezguen, S.; Golas, M. M.; Sander, B.; Mauksch, C.; Stark, H.; Aneja, M. K.; Rudolph, C.: Self-assembly of ternary insulin−polyethylenimine (PEI)−DNA nanoparticles for enhanced gene delivery and expression in alveolar epithelial cells. Biomacromolecules 10 (10), S. 2912 - 2920 (2009)
84.
Zeitschriftenartikel
Wolf, E.; Kastner, B.; Deckert, J.; Merz, C.; Stark, H.; Lührmann, R.: Exon, intron and splice site locations in the spliceosomal B complex. EMBO Journal 28, S. 2283 - 2292 (2009)
85.
Zeitschriftenartikel
Andersen, E. S.; Dong, M.; Nielsen, M. M.; Jahn, K.; Subramani, R.; Mamdouh, W.; Golas, M. M.; Sander, B.; Stark, H.; Oliveira, C. L. et al.; Pedersen, J. S.; Birkedal, V.; Besenbacher, F.; Gothelf, K. V.; Kjems, J.: Self-assembly of a nanoscale DNA box with a controllable lid. Nature 459 (7243), S. 73 - 76 (2009)
86.
Zeitschriftenartikel
Golas, M. M.; Boehm, C.; Sander, B.; Effenberger, K.; Brecht, M.; Stark, H.; Goeringer, H. U.: Snapshots of the RNA editing machine in trypanosomes captured at different assembly stages in vivo. EMBO Journal 28 (6), S. 766 - 778 (2009)
87.
Zeitschriftenartikel
Herzog, F.; Primorac, I.; Dube, P.; Lenart, P.; Sander, B.; Mechtler, K.; Stark, H.; Peters, J. M.: Structure of the anaphase-promoting complex/cyclosome interacting with a mitotic checkpoint complex. Science 323 (5920), S. 1477 - 1481 (2009)
88.
Zeitschriftenartikel
Fabrizio, P.; Dannenberg, J.; Dube, P.; Kastner, B.; Stark, H.; Urlaub, H.; Lührmann, R.: The evolutionarily conserved core design of the catalytic activation step of the yeast spliceosome. Molecular Cell 36 (4), S. 593 - 608 (2009)
89.
Zeitschriftenartikel
Lührmann, R.; Stark, H.: Structural mapping of spliceosomes by electron microscopy. Current Opinion in Structural Biology 19, S. 96 - 102 (2009)
90.
Zeitschriftenartikel
Sanchez, M.; Drechsler, M.; Stark, H.; Lipps, G.: DNA translocation activity of the multifunctional replication protein ORF904 from the archaeal plasmid pRN1. Nucleic Acids Research 37 (20), S. 6831 - 6848 (2009)
91.
Zeitschriftenartikel
Schmeisser, M.; Heisen, B.; Luettich, M.; Busche, B.; Hauer, F.; Koske, T.; Knauber, K. H.: Parallel, distributed and GPU computing technologies in single-particle electron microscopy. Acta Crystallographica D 65 (7), S. 659 - 671 (2009)
92.
Zeitschriftenartikel
Karaduman, R.; Dube, P.; Stark, H.; Fabrizio, P.; Kastner, B.; Luehrmann, R.: Structure of yeast U6 snRNPs: arrangement of Prp24p and the LSm complex as revealed by electron microscopy. RNA 14, S. 2528 - 2537 (2008)
93.
Zeitschriftenartikel
Haecker, I.; Sander, B.; Golas, M. M.; Wolf, E.; Karagoez, E.; Kastner, B.; Stark, H.; Fabrizio, P.; Luehrmann, R.: Localization of Prp8, Brr2, Snu114 and U4/U6 proteins in the yeast tri-snRNP by electron microscopy. Nature Structural and Molecular Biology 15 (11), S. 1206 - 1212 (2008)
94.
Zeitschriftenartikel
Chari, A.; Golas, M. M.; Klingenhaeger, M.; Neuenkirchen, N.; Sander, B.; Englbrecht, C.; Sickmann, A.; Stark, H.; Fischer, U.: An assembly chaperone collaborates with the SMN complex to generate spliceosomal SnRNPs. Cell 135 (3), S. 497 - 509 (2008)
95.
Zeitschriftenartikel
Kastner, B.; Fischer, N.; Golas, M. M.; Sander, B.; Dube, P.; Boehringer, D.; Hartmuth, K.; Deckert, J.; Hauer, F.; Wolf, E. et al.; Uchtenhagen, H.; Urlaub, H.; Herzog, F.; Peters, J. M.; Porschke, D.; Luehrmann, R.; Stark, H.: GraFix: sample preparation for single-particle electron cryomicroscopy. Nature Methods 5 (1), S. 53 - 55 (2008)
96.
Zeitschriftenartikel
Sirajuddin, M.; Farkasovsky, M.; Hauer, F.; Kuehlmann, D.; Macara, I. G.; Weyand, M.; Stark, H.; Wittinghofer, A.: Structural insight into filament formation by mammalian septins. Nature 449 (7160), S. 311 - 315 (2007)
97.
Zeitschriftenartikel
Kuehn-Hoelsken, E.; Dybkov, O.; Sander, B.; Luehrmann, R.; Urlaub, H.: Improved identification of enriched peptide–RNA cross-links from ribonucleoprotein particles (RNPs) by mass spectrometry. Nucleic Acids Research 35 (15), e95 (2007)
98.
Zeitschriftenartikel
Behzadnia, N.; Golas, M. M.; Hartmuth, K.; Sander, B.; Kastner, B.; Deckert, J.; Dube, P.; Will, C. L.; Urlaub, H.; Stark, H. et al.; Luehrmann, R.: Composition and three-dimensional EM structure of double affinity-purified, human prespliceosomal A complexes. The EMBO Journal 26 (6), S. 1737 - 1748 (2007)
99.
Zeitschriftenartikel
Konevega, A. L.; Fischer, N.; Semenkov, Y. P.; Stark, H.; Wintermeyer, W.; Rodnina, M. V.: Spontaneous reverse movement of mRNA-bound tRNA through the ribosome. Nature Structural Molecular Biology 14, S. 318 - 324 (2007)
100.
Zeitschriftenartikel
Sander, B.; Golas, M. M.; Makarov, E. M.; Brahms, H.; Kastner, B.; Luehrmann, R.; Stark, H.: Organization of Core Spliceosomal Components U5 snRNA Loop I and U4/U6 Di-snRNP within U4/U6.U5 Tri-snRNP as Revealed by Electron Cryomicroscopy. Molecular Cell 24 (2), S. 267 - 278 (2006)
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