Publications

Journal Article (279)

1.
Journal Article
Dennerlein, S.; Poerschke, S.; Oeljeklaus, S.; Wang, C.; Richter-Dennerlein, R.; Sattmann, J.; Bauermeister, D.; Hanitsch, E.; Stoldt, S.; Langer, T. et al.; Jakobs, S.; Warscheid, B.; Rehling, P.: Defining the interactome of the human mitochondrial ribosome identifies SMIM4 and TMEM223 as respiratory chain assembly factors. eLife 10, e68213 (2021)
2.
Journal Article
Bögeholz, L. A. K.; Mercier, E.; Wintermeyer, W.; Rodnina, M. V.: Kinetic control of nascent protein biogenesis by peptide deformylase. Scientific Reports 11, 24457 (2021)
3.
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Henke, J.-W.; Raja, A. S.; Feist, A.; Huang, G.; Arend, G.; Yang, Y.; Kappert, F. J.; Wang, R. N.; Möller, M.; Pan, J. et al.; Liu, J.; Kfir, O.; Ropers, C.; Kippenberg, T. J.: Integrated photonics enables continuous-beam electron phase modulation. Nature 600 (7890), pp. 653 - 658 (2021)
4.
Journal Article
Barbarics, B.; Eildermann, K.; Kaderali, L.; Cyganek, L.; Plessmann, U.; Bodemeyer, J.; Paul, T.; Ströbel, P.; Urlaub, H.; Tirilomis, T. et al.; Lenz, C.; Bohnenberger, H.: Proteomic mapping of atrial and ventricular heart tissue in patients with aortic valve stenosis. Scientific Reports 11, 24389 (2021)
5.
Journal Article
Merino, R. M.; Leon-Pinzon, C.; Stuehmer, W.; Möck, M.; Staiger, J. F.; Wolf, F.; Neef, A.: Theta activity paradoxically boosts gamma and ripple frequency sensitivity in prefrontal interneurons. Proceedings of the National Academy of Sciences of the USA 118 (51), e2114549118 (2021)
6.
Journal Article
Segelcke, D.; Fischer, H. K.; Hütte, M.; Dennerlein, S.; Benseler, F.; Brose, N.; Pogatzki-Zahn, E. M.; Schmidt, M.: Tmem160 contributes to the establishment of discrete nerve injury-induced pain behaviors in male mice. Cell Reports 37 (12), 110152 (2021)
7.
Journal Article
Lipstein, N.; Chang, S.; Lin, K.-H.; López-Murcia, F. J.; Neher, E.; Taschenberger, H.; Brose, N.: Munc13-1 is a Ca2+-phospholipid-dependent vesicle priming hub that shapes synaptic short-term plasticity and enables sustained neurotransmission. Neuron 109 (24), pp. 3980 - 4000.e7 (2021)
8.
Journal Article
Saul, P.; Yang, S.; Mamone, S.; Opazo, F.; Meyer, A.; Rizzoli, S. O.; Glöggler, S.: Exotic nuclear spin behavior in dendritic macromolecules. Physical Chemistry Chemical Physics 23 (46), pp. 26349 - 26355 (2021)
9.
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James, C.; Lenz, C.; Urlaub, H.; Kehlenbach, R. H.: Sequestosome 1 is part of the interaction network of VAPB. International Journal of Molecular Sciences 22 (24), 13271 (2021)
10.
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Khalak, Y.; Tresadern, G.; Aldeghi, M.; Baumann, H.; Mobley, D.; de Groot, B. L.; Gapsys, V.: Alchemical absolute protein-ligand binding free energies for drug design. Chemical Science 12, pp. 13958 - 13971 (2021)
11.
Journal Article
Hartich, D.; Godec, A.: Emergent memory and kinetic hysteresis in strongly driven networks. Physical Review X 11 (4), 041047 (2021)
12.
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Arinrad, S.; Wilke, J. B. H.; Seelbach, A.; Doeren, J.; Hindermann, M.; Butt, U. J.; Steixner-Kumar, A. A.; Spieth, L.; Ronnenberg, A.; Pan, H. et al.; Berghoff, S. A.; Hollmann, M.; Lüder, F.; Nave, K.-A.; Bechter, K.; Ehrenreich, H.: NMDAR1 autoantibodies amplify behavioral phenotypes of genetic white matter inflammation: a mild encephalitis model with neuropsychiatric relevance. Molecular Psychiatry 27, pp. 4974 - 4983 (2021)
13.
Journal Article
Mühlhausen, S.; Schmitt, H. D.; Plessmann, U.; Mienkus, P.; Sternisek, P.; Perl, T.; Weig, M.; Urlaub, H.; Bader, O.; Kollmar, M.: Proteogenomics analysis of CUG codon translation in the human pathogen Candida albicans. BMC Biology 19, 258 (2021)
14.
Journal Article
Boehm, U.; Nelson, G.; Brown, C. M.; Bagley, S.; Bajcsy, P.; Bischof, J.; Dauphin, A.; Dobbie, I. M.; Eriksson, J. E.; Faklaris, O. et al.; Fernandez-Rodriguez, J.; Ferrand, A.; Gelman, L.; Gheisari, A.; Hartmann, H.; Kukat, C.; Laude, A.; Mitkovski, M.; Munck, S.; North, A. J.; Rasse, T. M.; Resch-Genger, U.; Schuetz, L. C.; Seitz, A.; Strambio-De-Castillia, C.; Swedlow, J. R.; Nitschke, R.: QUAREP-LiMi: a community endeavor to advance quality assessment and reproducibility in light microscopy. Nature Methods 18 (12), pp. 1424 - 1427 (2021)
15.
Journal Article
Edgar, J. M.; McGowan, E.; Chapple, K. J.; Möbius, W.; Lemgruber, L.; Insall, R. H.; Nave, K.-A.; Boullerne, A.: Río‐Hortega's drawings revisited with fluorescent protein defines a cytoplasm‐filled channel system of CNS myelin. Journal of Anatomy 239 (6), pp. 1241 - 1255 (2021)
16.
Journal Article
Kehl, A.; Hiller, M.; Hecker, F.; Tkach, I.; Dechert, S.; Bennati, M.; Meyer, A.: Resolution of chemical shift anisotropy in 19F ENDOR spectroscopy at 263 GHz/9.4 T. Journal of Magnetic Resonance 333, 107091 (2021)
17.
Journal Article
Lapolla, A.; Godec, A.: BetheSF V2: 3-point propagator and additional external potentials. Computer Physics Communications 269, 108131 (2021)
18.
Journal Article
Vieira, A. M.; Zahed, F.; Crispim, A. C.; de Souza Bento, E.; de Freitas Oliveira França, R.; Pinheiro, I. O.; Pardo, L. A.; Carvalho, B. M.: Production of levan from Bacillus subtilis var. natto and apoptotic effect on SH-SY5Y neuroblastoma cells. Carbohydrate Polymers 273, 118613 (2021)
19.
Journal Article
Henneberg, F.; Chari, A.: Chromatography-free purification strategies for large biological macromolecular complexes involving fractionated PEG precipitation and density gradients. Life 11, 1289 (2021)
20.
Journal Article
Henneberg, F.; Chari, A.: Chromatography-free purification strategies for large biological macromolecular complexes involving fractionated PEG precipitation and density gradients. Life 11 (12), 1289 (2021)
21.
Journal Article
Brüser, C.; Keller-Findeisen, J.; Jakobs, S.: The TFAM-to-mtDNA ratio defines inner-cellular nucleoid populations with distinct activity levels. Cell Reports 37 (8), 110000 (2021)
22.
Journal Article
Güran, A.; Ji, Y.; Fang, P.; Pan, K.-T.; Urlaub, H.; Avkiran, M.; Lenz, C.: Quantitative analysis of the cardiac phosphoproteome in response to acute β-adrenergic receptor stimulation in vivo. International Journal of Molecular Sciences 22 (22), 12584 (2021)
23.
Journal Article
Gerasimaite, R.; Bucevicius, J.; Kiszka, K.; Schnorrenberg, S.; Kostiuk, G.; Koenen, T.; Lukinavičius, G.: Blinking fluorescent probes for tubulin nanoscopy in living and fixed cells. ACS Chemical Biology 16 (11), pp. 2130 - 2136 (2021)
24.
Journal Article
Fianu, I.; Chen, Y.; Dienemann, C.; Dybkov, O.; Linden, A.; Urlaub, H.; Cramer, P.: Structural basis of Integrator-mediated transcription regulation. Science 374 (6569), pp. 883 - 887 (2021)
25.
Journal Article
Cruz-Zaragoza, L. D.; Dennerlein, S.; Linden, A.; Yousefi, R.; Lavdovskaia, E.; Aich, A.; Falk, R. R.; Gomkale, R.; Schöndorf, T.; Bohnsack, M. T. et al.; Richter-Dennerlein, R.; Urlaub, H.; Rehling, P.: An in vitro system to silence mitochondrial gene expression. Cell 184 (23), pp. 5824 - 5837.e15 (2021)
26.
Journal Article
Butkevich, A. N.; Weber, M.; Cereceda Delgado, A.R.; Ostersehlt, L. M.; d'Este, E.; Hell, S. W.: Photoactivatable fluorescent dyes with hydrophilic caging groups and their use in multicolor nanoscopy. Journal of the American Chemical Society 143 (44), pp. 18388 - 18393 (2021)
27.
Journal Article
Orth, B.; Sander, B.; Möglich, A.; Diederichs, K.; Eilers, M.; Lorenz, S.: Identification of an atypical interaction site in the BTB domain of the MYC-interacting zinc-finger protein 1. Structure 29 (11), pp. 1230 - 1240 (2021)
28.
Journal Article
Borodin, D.; Rahinov, I.; Galparsoro, O.; Fingerhut, J.; Schwarzer, M.; Golibrzuch, K.; Skoulatakis, G.; Auerbach, D. J.; Kandratsenka, A.; Kitsopoulos, T. N. et al.; Wodtke, A. M.: Kinetics of NH3 desorption and diffusion on Pt: Implications for the Ostwald process. Journal of the American Chemical Society 143 (43), pp. 18305 - 18316 (2021)
29.
Journal Article
Schiemann, O.; Heubach, C. A.; Abdullin, D.; Ackermann, K.; Azarkh, M.; Bagryanskaya, E. G.; Drescher, M.; Endeward, B.; Freed, J. H.; Galazzo, L. et al.; Goldfarb, D.; Hett, T.; Hofer, L. E.; Ibáñez, L. F.; Hustedt, E. J.; Kucher, S.; Kuprov, I.; Lovett, J. E.; Meyer, A.; Ruthstein, S.; Saxena, S.; Stoll, S.; Timmel, C. R.; Valentin, M. D.; Mchaourab, H. S.; Prisner, T. F.; Bode, B. E.; Bordignon, E.; Bennati, M.; Jeschke, G.: Benchmark test and guidelines for DEER/PELDOR experiments on nitroxide-labeled biomolecules. Journal of the American Chemical Society 143 (43), pp. 17875 - 17890 (2021)
30.
Journal Article
Zayko, S.; Kfir, O.; Heigl, M.; Lohmann, M.; Sivis, M.; Albrecht, M.; Ropers, C.: Ultrafast high-harmonic nanoscopy of magnetization dynamics. Nature Communications 12, 6337 (2021)
31.
Journal Article
Bodenhausen, G.; Ernst, M.; Griesinger, C.; Keller, T.; Kessler, H.; Meier, B.; Wokaun, A.: Richard Ernst (1933–2021). Angewandte Chemie International Edition 60 (45), pp. 23944 - 23945 (2021)
32.
Journal Article
Dauer née Joppe, K.; Tatenhorst, L.; Caldi Gomes, L.; Zhang, S.; Parvaz, M.; Carboni, E.; Roser, A.-E.; El DeBakey, H.; Bähr, M.; Vogel-Mikuš, K. et al.; Ip, C. W.; Becker, S.; Zweckstetter, M.; Lingor, P.: Brain iron enrichment attenuates α-synuclein spreading after injection of preformed fibrils. Journal of Neurochemistry 159 (3), pp. 554 - 573 (2021)
33.
Journal Article
Ni, G.; Zeng, J.; Revez, J.A.; Wang, Y.; Zheng, Z.; Ge, T.; Restuadi, R.; Kiewa, J.; Nyholt, D.R.; Coleman, J.R.I. et al.; Smoller, J.W.; Schizophrenia Working Group of the Psychiatric Genomics Consortium; Ehrenreich, H.; Major Depressive Disorder Working Group of the Psychiatric Genomics Consortium; Yang, J.; Visscher, P. M.; Wray, N. R.: A comparison of ten polygenic score methods for psychiatric disorders applied across multiple cohorts. Biological Psychiatry 90 (9), pp. 611 - 620 (2021)
34.
Journal Article
Reinhardt, M.; Grubmüller, H.: Small-sample limit of the Bennett acceptance ratio method and the variationally derived intermediates. Physical Review E 104 (5), 054133 (2021)
35.
Journal Article
Berghoff, S. A.; Spieth, L.; Sun, T.; Hosang, L.; Depp, C.; Sasmita, A. O.; Vasileva, M. H.; Scholz, P.; Zhao, Y.; Krüger, D. et al.; Wichert, S.; Brown, E. R.; Michail, K.; Nave, K.-A.; Bonn, S.; Odoardi, F.; Rossner, M.; Ischebeck, T.; Edgar, J. M.; Saher, G.: Neuronal cholesterol synthesis is essential for repair of chronically demyelinated lesions in mice. Cell Reports 37 (4), 109889 (2021)
36.
Journal Article
Lohner, P.; Zmyslia, M.; Thurn, J.; Pape, J. K.; Gerasimaite, R.; Keller-Findeisen, J.; Groeer, S.; Deuringer, B.; Süss, R.; Walther, A. et al.; Hell, S. W.; Lukinavičius, G.; Hugel, T.; Jessen-Trefzer, C.: Inside a shell – organometallic catalysis inside encapsulin nanoreactors. Angewandte Chemie International Edition 133 (44), pp. 24028 - 24034 (2021)
37.
Journal Article
Aquino, G. R. R.; Hackert, P.; Krogh, N.; Pan, K. T.; Jaafar, M.; Henras, A. K.; Nielsen, H.; Urlaub, H.; Bohnsack, K. E.; Bohnsack, M. T.: The RNA helicase Dbp7 promotes domain V/VI compaction and stabilization of inter-domain interactions during early 60S assembly. Nature Communications 12, 6152 (2021)
38.
Journal Article
Kokic, G.; Wagner, F. R.; Chernev, A.; Urlaub, H.; Cramer, P.: Structural basis of human transcription–DNA repair coupling. Nature 598 (7880), pp. 368 - 372 (2021)
39.
Journal Article
Vemulapalli, S. P.; Becker, S.; Griesinger, C.; Rezaei-Ghaleh, N.: Combined high-pressure and multiquantum NMR and molecular simulation propose a role for N-terminal salt bridges in amyloid-beta. The Journal of Physical Chemistry Letters 12 (40), pp. 9933 - 9939 (2021)
40.
Journal Article
Aibara, S.; Dienemann, C.; Cramer, P.: Structure of an inactive RNA polymerase II dimer. Nucleic Acids Research 49 (18), pp. 10747 - 10755 (2021)
41.
Journal Article
Petrychenko, V.; Peng, B. Z.; Schwarzer, A. C. d. A. P.; Peske, F.; Rodnina, M. V.; Fischer, N.: Structural mechanism of GTPase-powered ribosome-tRNA movement. Nature Communications 12 (1), 5933 (2021)
42.
Journal Article
Bergner, C. G.; Genc, N.; Hametner, S.; Franz, J.; van der Meer, F.; Mitkovski, M.; Weber, M. S.; Stoltenburg-Didinger, G.; Kühl, J.-S.; Köhler, W. et al.; Brück, W.; Gärtner, J.; Stadelmann, C.: Concurrent axon and myelin destruction differentiates X-linked adrenoleukodystrophy from multiple sclerosis. Glia 69 (10), pp. 2362 - 2377 (2021)
43.
Journal Article
García-Martínez, J.; Medina, D. A.; Bellvís, P.; Sun, M.; Cramer, P.; Chávez, S.; Pérez-Ortín, J. E.: The total mRNA concentration buffering system in yeast is global rather than gene-specific. RNA 27 (10), pp. 1281 - 1290 (2021)
44.
Journal Article
Güttler, T.; Aksu, M.; Dickmanns, A.; Stegmann, K. M.; Gregor, K.; Rees, R.; Taxer, W.; Rymarenko, O.; Schünemann, J.; Dienemann, C. et al.; Gunkel, P.; Mussil, B.; Krull, J.; Teichmann, U.; Groß, U.; Cordes, V.; Dobbelstein, M.; Görlich, D.: Neutralization of SARS-CoV-2 by highly potent, hyperthermostable, and mutation-tolerant nanobodies. EMBO Journal 40 (19), e107985 (2021)
45.
Journal Article
Nelson, G.; Boehm, U.; Bagley, S.; Bajcsy, P.; Bischof, J.; Brown, C. M.; Dauphin, A.; Dobbie, I. M.; Eriksson, J. E.; Faklaris, O. et al.; Fernandez-Rodriguez, J.; Ferrand, A.; Gelman, L.; Gheisari, A.; Hartmann, H.; Kukat, C.; Laude, A.; Mitkovski, M.; Munck, S.; North, A. J.; Rasse, T. M.; Resch-Genger, U.; Schuetz, L. C.; Seitz, A.; Strambio-De-Castillia, C.; Swedlow, J. R.; Alexopoulos, I.; Aumayr, K.; Avilov, S.; Bakker, G. J.; Bammann, R. R.; Bassi, A.; Beckert, H.; Beer, S.; Belyaev, Y.; Bierwagen, J.; Birngruber, K. A.; Bosch, M.; Breitlow, J.; Cameron, L. A.; Chalfoun, J.; Chambers, J. J.; Chen, C. L.; Conde-Sousa, E.; Corbett, A. D.; Cordelieres, F. P.; Nery, E. D.; Dietzel, R.; Eismann, F.; Fazeli, E.; Felscher, A.; Fried, H.; Gaudreault, N.; Goh, W. I.; Guilbert, T.; Hadleigh, R.; Hemmerich, P.; Holst, G. A.; Itano, M. S.; Jaffe, C. B.; Jambor, H. K.; Jarvis, S. C.; Keppler, A.; Kirchenbuechler, D.; Kirchner, M.; Kobayashi, N.; Krens, G.; Kunis, S.; Lacoste, J.; Marcello, M.; Martins, G. G.; Metcalf, D. J.; Mitchell, C. A.; Moore, J.; Mueller, T.; Nelson, M. S.; Ogg, S.; Onami, S.; Palmer, A. L.; Paul-Gilloteaux, P.; Pimentel, J. A.; Plantard, L.; Podder, S.; Rexhepaj, E.; Royon, A.; Saari, M. A.; Schapman, D.; Schoonderwoert, V.; Schroth-Diez, B.; Schwartz, S.; Shaw, M.; Spitaler, M.; Stoeckl, M. T.; Sudar, D.; Teillon, J.; Terjung, S.; Thuenauer, R.; Wilms, C. D.; Wright, G. D.; Nitschke, R.: QUAREP-LiMi: A community-driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy. Journal of Microscopy 284 (1), pp. 56 - 73 (2021)
46.
Journal Article
Yalunin, S. V.; Feist, A.; Ropers, C.: Tailored high-contrast attosecond electron pulses for coherent excitation and scattering. Physical Review Research 3 (3), L032036 (2021)
47.
Journal Article
Zhang, R.; Mirdita, M.; Levy Karin, E.; Norroy, C.; Galiez, C.; Söding, J.: SpacePHARER: sensitive identification of phages from CRISPR spacers in prokaryotic hosts. Bioinformatics 37 (19), pp. 3364 - 3366 (2021)
48.
Journal Article
Binotti, B.; Jahn, R.; Pérez-Lara, A.: An overview of the synaptic vesicle lipid composition. Archives of Biochemistry and Biophysics 709, 108966 (2021)
49.
Journal Article
Gomkale, R.; Linden, A.; Neumann, P.; Schendzielorz, A. B.; Stoldt, S.; Dybkov, O.; Kilisch, M.; Schulz, C.; Cruz-Zaragoza, L. D.; Schwappach, B. et al.; Ficner, R.; Jakobs, S.; Urlaub, H.; Rehling, P.: Mapping protein interactions in the active TOM-TIM23 supercomplex. Nature Communications 12, 5715 (2021)
50.
Journal Article
Blom, K.; Godec, A.: Criticality in cell adhesion. Physical Review X 11 (3), 031067 (2021)
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